Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0739 ATGTCTGGAGCCATAGACATGGACCACGTGGGTTTTTCCAAACCCAAATCATCATCACCGGCGACTTCTCCGACCACCGATCATGGTCGTAGTAACAAAACCGGTTCTATTTCAATGGATCATGTTCTTTTGGCTTTGCGTGAGACTAAGGAAGAAAGGGATCTTCGTATTCGGAGTTTGTTTAATTTCTTTGATTCTACCAATAAAGGGTATTTGGATTATACTCACATTGAAGCAGGTTTATCTGCACTTCAGATACCACCTGAATATAAATATGCTAAAGAACTTTTTAAGGTTTGTGATGCTGATAGAGATGGAAGAATTGATTATCAAGATTTTAGACGTTATATGGATGATAAAGAACTTGAACTTTATAGAATTTTTCAAGCTATTGATGTTGCACATAATGGTTGTATTTTACCTGAAGAACTCTGGGATGCACTTGTCAAGGCTGGGATTGAAATTGATGAGGTAGAACTTGCGCGCTTTGTTGAGCATGTTGATAAGGATAATAATGGAATTATCACTTTTGAAGAATGGAGAGATTTTCTTCTACTTTATCCTCATGAAGCAACCCTTGAAAATATATATCAACATTGGGAGAGGATGTGCCTTGTAGACATTGGGGAACAAGCTGTGATTCCCGAAGGCATCAGCAAACACGTGCACAGGAGCCGGTATTTTATTGCAGGCGGAATAGCAGGAGCTGCTTCTCGCACAGCAACCGCTCCTCTTGATCGTCTAAAGGTGGTCTTACAAATTCAGACTGGAAAGGCGTCGATTATGCCAGCAGTGATGAAGATATGGCAACGAGATGGTTTATTAGGGTTTTTCCGAGGTAATGGATTGAACGTTGTGAAGGTTGCACCGGAGAGTGCCATCAAGTTTTATGCTTATGAAATGCTGAAAAATGTAATTGGAGATAGTCAAGGAAACAAGACAGATATTGGTACCGCTGGAAGACTCTTTGCAGGTGGCATGGCTGGTGCCATTGCGCAGATTGCTATCTATCCATTAGATCTTATCAAAACTAGGTTGCAGACTTGTGCTTCTGAAGGTGGAAAGGGTCCTAAGCTTGGAACACTTACAAAAGATATATGGGTCCAAGAGGGACCCCGCGCTTTCTATAGAGGGCTTGTTCCATCTCTTCTTGGTATGATTCCTTATGCGGGCATTGATCTCACTGCTTATGACACCTTGAAAGATTTATCCAAGAAATATATTGTTTATGACAGTGAACCTGGTCCTCTAGTACAACTCGGATGTGGGACGGTTTCAGGAGCTCTCGGAGCTACATGTGTCTACCCACTGCAGGTTATCCGTACAAGGCTGCAGGCACAACCTACCAACACTTCTTGTGCTTACAGGGGAATGTCTGATGTTTTTTGGAAAACCCTTAAAGATGAAGGCTTTCGAGGGTTCTACAAGGGACTCATTCCGAATCTCCTTAAAGTTGTGCCAGCTGCAAGCATTACTTATATGGTTTATGAAAATATGAAGAAGAGTTTAGATCTTGATTAG 1521 0.4162 MSGAIDMDHVGFSKPKSSSPATSPTTDHGRSNKTGSISMDHVLLALRETKEERDLRIRSLFNFFDSTNKGYLDYTHIEAGLSALQIPPEYKYAKELFKVCDADRDGRIDYQDFRRYMDDKELELYRIFQAIDVAHNGCILPEELWDALVKAGIEIDEVELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATLENIYQHWERMCLVDIGEQAVIPEGISKHVHRSRYFIAGGIAGAASRTATAPLDRLKVVLQIQTGKASIMPAVMKIWQRDGLLGFFRGNGLNVVKVAPESAIKFYAYEMLKNVIGDSQGNKTDIGTAGRLFAGGMAGAIAQIAIYPLDLIKTRLQTCASEGGKGPKLGTLTKDIWVQEGPRAFYRGLVPSLLGMIPYAGIDLTAYDTLKDLSKKYIVYDSEPGPLVQLGCGTVSGALGATCVYPLQVIRTRLQAQPTNTSCAYRGMSDVFWKTLKDEGFRGFYKGLIPNLLKVVPAASITYMVYENMKKSLDLD* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0739 506 Gene3D - 135 210 - -
Tpr3g0739 506 MobiDBLite consensus disorder prediction 15 33 - -
Tpr3g0739 506 SUPERFAMILY EF-hand 43 221 IPR011992 -
Tpr3g0739 506 ProSiteProfiles EF-hand calcium-binding domain profile. 88 123 IPR002048 GO:0005509
Tpr3g0739 506 ProSiteProfiles Solute carrier (Solcar) repeat profile. 414 502 IPR018108 -
Tpr3g0739 506 SMART efh_1 123 151 IPR002048 GO:0005509
Tpr3g0739 506 SMART efh_1 92 120 IPR002048 GO:0005509
Tpr3g0739 506 SMART efh_1 159 187 IPR002048 GO:0005509
Tpr3g0739 506 SMART efh_1 56 84 IPR002048 GO:0005509
Tpr3g0739 506 ProSitePatterns EF-hand calcium-binding domain. 101 113 IPR018247 -
Tpr3g0739 506 ProSiteProfiles Solute carrier (Solcar) repeat profile. 222 305 IPR018108 -
Tpr3g0739 506 PANTHER SOLUTE CARRIER FAMILY 25 64 504 - -
Tpr3g0739 506 MobiDBLite consensus disorder prediction 1 33 - -
Tpr3g0739 506 Pfam EF hand 95 115 IPR002048 GO:0005509
Tpr3g0739 506 PRINTS Mitochondrial carrier protein signature 227 240 IPR002067 GO:0055085
Tpr3g0739 506 PRINTS Mitochondrial carrier protein signature 240 254 IPR002067 GO:0055085
Tpr3g0739 506 PRINTS Mitochondrial carrier protein signature 280 300 IPR002067 GO:0055085
Tpr3g0739 506 PRINTS Mitochondrial carrier protein signature 331 349 IPR002067 GO:0055085
Tpr3g0739 506 PRINTS Mitochondrial carrier protein signature 376 394 IPR002067 GO:0055085
Tpr3g0739 506 PRINTS Mitochondrial carrier protein signature 423 445 IPR002067 GO:0055085
Tpr3g0739 506 ProSiteProfiles EF-hand calcium-binding domain profile. 155 190 IPR002048 GO:0005509
Tpr3g0739 506 SUPERFAMILY Mitochondrial carrier 221 498 IPR023395 -
Tpr3g0739 506 ProSiteProfiles EF-hand calcium-binding domain profile. 124 154 IPR002048 GO:0005509
Tpr3g0739 506 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 64 504 - -
Tpr3g0739 506 Pfam EF-hand domain pair 123 182 IPR002048 GO:0005509
Tpr3g0739 506 ProSitePatterns EF-hand calcium-binding domain. 168 180 IPR018247 -
Tpr3g0739 506 ProSiteProfiles Solute carrier (Solcar) repeat profile. 316 403 IPR018108 -
Tpr3g0739 506 Gene3D - 30 124 - -
Tpr3g0739 506 Pfam Mitochondrial carrier protein 225 308 IPR018108 -
Tpr3g0739 506 Pfam Mitochondrial carrier protein 316 406 IPR018108 -
Tpr3g0739 506 Pfam Mitochondrial carrier protein 415 503 IPR018108 -
Tpr3g0739 506 Gene3D Mitochondrial carrier domain 218 504 IPR023395 -
Tpr3g0739 506 ProSiteProfiles EF-hand calcium-binding domain profile. 52 87 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0739 Tpr-Chr3 7083490 7087999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0739 9 506 EF-hand Containing Proteins AT5G51050 74.200 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0739 K14684 - gmx:100791305 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0739 3 7083490 7087999 Tpr3g3259 3 35898355 35901828 ECH
Tpr3g0739 3 7083490 7087999 Tpr3g0739 3 7083490 7087999 ECH