Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0729 ATGGAAGCAATGAAGGGTTGTCATGATAATAAGGGATCAAGAAGATTAGAAGAAGAACAAGAAGAAGATTGTAACAAAGATTTAGAAGCTGCAAAGACACGTGGAGTGGTTGCAAATGATGTTGTAACAGAAACTGAACTCAACAAAATCCGTCTTGTGAGAGCTTTTGTTGAAAAACATGATCCATCTTCTAAGGAAGAAGATGATTTGATGATTAGAAGATTTCTACGTGCTCGTGATTTAGATGTGGAGAAAGCTTCAGCAATGTTTCTTAAGTACTTGAAATGGAGACACTCATTTGTTCCAAATGGTTCCATATCTCCATCACAGGTTCCTAATGAAATTGCAGATGACAAGGCGTTTTGCCAAGGGCGCGACAAGACTGGTCGACCTATACTTTTTGTCTTTGGTCGAAAACATTTTCAAAAGAAAGATGGTTTGGATGAATTCAAAAGGTTTGCAGTCTATTGTCTTGAGAAAATGTGTGCAAGCATGCCACCCGGGGAAGAAAAATTTGTCGGTATAGCAGAACTGAAGGGATGGGGTTACGCGAATAGTGATGTACGAGGATACATTAATGCTCTCTCCATTTTGCAGGATTACTACCCTGAAAGATTAGGGAAGTTGTTTATTCTCCACGCACCATACATTTTTATGAAAGTGTGGAAAATAATTTACCCGTTCATTGACAACAAAACCAAGAAGAAGATAATATTTGTGGAAAACAATAAGCTGAAATCAACACTTCTAGAAGATATAGACGAAAGTCAGCTACCTGAGATATACGGAGGCAAACTGCAATTAGTCCCCATCCAGAATAGTTAA 825 0.3818 MEAMKGCHDNKGSRRLEEEQEEDCNKDLEAAKTRGVVANDVVTETELNKIRLVRAFVEKHDPSSKEEDDLMIRRFLRARDLDVEKASAMFLKYLKWRHSFVPNGSISPSQVPNEIADDKAFCQGRDKTGRPILFVFGRKHFQKKDGLDEFKRFAVYCLEKMCASMPPGEEKFVGIAELKGWGYANSDVRGYINALSILQDYYPERLGKLFILHAPYIFMKVWKIIYPFIDNKTKKKIIFVENNKLKSTLLEDIDESQLPEIYGGKLQLVPIQNS* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0729 274 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 124 270 IPR001251 -
Tpr3g0729 274 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 25 274 - -
Tpr3g0729 274 SUPERFAMILY CRAL/TRIO domain 118 267 IPR036865 -
Tpr3g0729 274 SUPERFAMILY CRAL/TRIO N-terminal domain 43 103 IPR036273 -
Tpr3g0729 274 Gene3D - 3 272 IPR036865 -
Tpr3g0729 274 Pfam CRAL/TRIO domain 119 264 IPR001251 -
Tpr3g0729 274 SMART CRAL_TRIO_N_2 68 93 IPR011074 -
Tpr3g0729 274 PANTHER OS03G0850700 PROTEIN 25 274 - -
Tpr3g0729 274 SMART sec14_4 114 267 IPR001251 -
Tpr3g0729 274 CDD SEC14 121 265 IPR001251 -
Tpr3g0729 274 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0729 Tpr-Chr3 7011297 7016012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0729 74 260 Acyl Lipid Metabolism Gene Families AT5G47730 26.316 1.91e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0729 - - mtr:MTR_8g096170 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0729 3 7011297 7016012 Tpr3g3265 3 35934596 35937224 ECH
Tpr3g0729 3 7011297 7016012 Tpr3g0729 3 7011297 7016012 ECH
Tpr3g0729 3 7011297 7016012 Tpr3g3265 3 35934596 35937224 PCT