Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0681 ATGTCTAGTCTCGGTGGCTCTTCCCGAAAGAGTGGTTCGTTTTTGAGTAGCCCTACCCGGTCAAAGAAGAAAGCCTCCGATTATTCACCACCGGATTCCACTTTTCGTAAACCATTTCCTCCTATGCGCACCACCACGGGAGAGCGAACTGTGAAATCATTGCGACTTTCAAAGGCATTGACAGTGCCTGAAACAACAACTGTCTATGAAGCTTGCCGTCGGATGGCTGTTCGCAGAGTAGATGCTCTATTATTAACTGATTCTAATGCTTTGCTCTGTGGAATCCTCACAGACAAGGATATAACAACAAGAGTTATTGCCCGTGAGGTTAATCTTGAAGACACACCTTGTTCCATGGTTATGACAAGGAATCCGGTATTTGTCCTTACCGATACTCTTGCCGTTGAAGCACTCCAAAAGATGGTGCAAGGGAGATTCAGACATTTACCTGTGGTGGAGAATGGAGAAGTGGTTGCTATCCTTGACATAGCTAAGTGTTTATATGATGCCATTGCCCGTATGGAAAGGGCTGCAGAGAAAGGAAAGGCAATTGCAGCAGCTGTTGAAGGTTTCGAAAAACACTGTGGAGCATCTCCCTCTGGCTCCAATTCATCATTCATTGATACTCTTCGGGAGCAGATATTTAAGCCATCATTGTCTACAATCATTCCTGAGAATTCAAAGGTTGTTACAGTTTCACCAACAGATTCGGTTTTGTCAACAACGAAAAAGATGCTTGAACTTCGTGCAAGTGCTGCTGTTGTAACAGTTGATAACAAACCTTGCGGTATCCTTACTTCAAAGGATATCTTGATGCGAGTAATAGCACAAAATCTCTCCCCATCGTCAACTCTTGTTGAGACGGTCATGACTGCAAATCCGGAATGTGCAATAATTGATACACCAATTGTTGATGCACTTCACATAATGCATAATGGAAAGTTTTTAAATCTTCCCGTGGTTGATAGAGATGGCATTGTTGTTGCTACGGTTGATGTGATTAGTATCACTCATGCTGCTGTGGCTACAGCTAGTCAGGCTGGGAATACTGCCAATATGAACAATGAAGCTGCCAACACCATGATACAAAAGTTTTGGGATTCGGCCATGGCCTTCACTCCAAATGACGAGGAAGAAGATTCACAAAGTGAAAATTCCTTGAAATTGATTTCCGAAGGAGGAGAAACAGGGAGATCCATTCCGTATAATGGATCAAGCATGCAGACCACATTTTCCTTCAAATTACAAGATAAGAAGGGTAGACTGCATAGATTCACCTGCGATACTCGGAGCTTGACAGAAGTTATAACTTGCATCATTCAGAGAGTAGGCGATGACATTGACCCGAAGAACCAGCCCCAAATTTTGTATGAAGATGAAGAGCATGATAAAGTTGTATTGGCTTCAGATAGTGATCTCGCAGCAGCCGTGGACCATGCAAAAATGGCTGGTTTGAAGGGATTGAGATTGCACTTAGATTACTCTGGAACATGTGGTTATGGAACAAAATCAAGTTTAAATTCGGAATATGCTAATTCAGAAGCATGGGCCTCGGCCTATCATGCCGTTGCAGCTGGAGCTGCAGTTGTTGCTGCCTTAGGCCTATTAGCGTTATTCAAGAGAAGACAATGA 1632 0.4326 MSSLGGSSRKSGSFLSSPTRSKKKASDYSPPDSTFRKPFPPMRTTTGERTVKSLRLSKALTVPETTTVYEACRRMAVRRVDALLLTDSNALLCGILTDKDITTRVIAREVNLEDTPCSMVMTRNPVFVLTDTLAVEALQKMVQGRFRHLPVVENGEVVAILDIAKCLYDAIARMERAAEKGKAIAAAVEGFEKHCGASPSGSNSSFIDTLREQIFKPSLSTIIPENSKVVTVSPTDSVLSTTKKMLELRASAAVVTVDNKPCGILTSKDILMRVIAQNLSPSSTLVETVMTANPECAIIDTPIVDALHIMHNGKFLNLPVVDRDGIVVATVDVISITHAAVATASQAGNTANMNNEAANTMIQKFWDSAMAFTPNDEEEDSQSENSLKLISEGGETGRSIPYNGSSMQTTFSFKLQDKKGRLHRFTCDTRSLTEVITCIIQRVGDDIDPKNQPQILYEDEEHDKVVLASDSDLAAAVDHAKMAGLKGLRLHLDYSGTCGYGTKSSLNSEYANSEAWASAYHAVAAGAAVVAALGLLALFKRRQ* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0681 543 SUPERFAMILY CBS-domain pair 227 340 IPR046342 -
Tpr3g0681 543 ProSiteProfiles CBS domain profile. 222 282 IPR000644 -
Tpr3g0681 543 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 36 531 - -
Tpr3g0681 543 CDD PB1_MUG70 411 495 - -
Tpr3g0681 543 Pfam CBS domain 226 272 IPR000644 -
Tpr3g0681 543 Pfam CBS domain 286 331 IPR000644 -
Tpr3g0681 543 Pfam CBS domain 57 102 IPR000644 -
Tpr3g0681 543 Pfam CBS domain 120 161 IPR000644 -
Tpr3g0681 543 MobiDBLite consensus disorder prediction 1 48 - -
Tpr3g0681 543 Pfam PB1 domain 410 493 IPR000270 GO:0005515
Tpr3g0681 543 ProSiteProfiles CBS domain profile. 55 115 IPR000644 -
Tpr3g0681 543 ProSiteProfiles CBS domain profile. 121 179 IPR000644 -
Tpr3g0681 543 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED 36 531 IPR034896 -
Tpr3g0681 543 MobiDBLite consensus disorder prediction 1 24 - -
Tpr3g0681 543 SMART cbs_1 293 341 IPR000644 -
Tpr3g0681 543 SMART cbs_1 124 168 IPR000644 -
Tpr3g0681 543 SMART cbs_1 58 106 IPR000644 -
Tpr3g0681 543 SMART cbs_1 228 275 IPR000644 -
Tpr3g0681 543 SMART PB1_new 410 495 IPR000270 GO:0005515
Tpr3g0681 543 ProSiteProfiles PB1 domain profile. 408 495 IPR000270 GO:0005515
Tpr3g0681 543 Gene3D - 199 354 IPR046342 -
Tpr3g0681 543 Gene3D - 38 186 IPR046342 -
Tpr3g0681 543 SUPERFAMILY CBS-domain pair 48 164 IPR046342 -
Tpr3g0681 543 SUPERFAMILY CAD & PB1 domains 405 499 - -
Tpr3g0681 543 ProSiteProfiles CBS domain profile. 290 348 IPR000644 -
Tpr3g0681 543 CDD CBS_pair_MUG70_1 56 172 - -
Tpr3g0681 543 CDD CBS_pair_MUG70_2 226 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0681 Tpr-Chr3 6566485 6572663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0681 - - gmx:100783514 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0681 3 6566485 6572663 Tpr3g0681 3 6566485 6572663 ECH
Tpr3g3319 3 36621877 36628598 Tpr3g0681 3 6566485 6572663 PCT