Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0673 ATGGCTCTGCAACAACAATTAGATAGGTTCAAGAAACAGCAAGAAAAGTGTCAATCAACACTTTCGAGCATTGCAGCAAGCAAGGTTGGTGGCAGAAAACCTAATACTCCGGTAGTAGCTGCAGTATCGACTAATGGAAGAAATGCAACAACTGGTATCAAATTCTCTAAAGATACTGAGAGGCTTCAGCATATTAACAGCATACGGAAAGCCCCCGTAGGTGCTCAGATGAAGCGTGTTATTGATCTATTGCTTGAGACACGACAAGCATTTACACCAGAGCAAATAAATGAAGCATGCTATGTTGACATGGGGGCTAACAAAGATGTTTTTGACAGTCTGAGGAAAAACCCAAAAGTAAACTATGACGGGCAACGGTTCTCTTACAAGGCAAAGTATGGCCTTAAGGACAAAACTGAGCTTCTTCAACTGATACGTAAGTATCCAGAGGGCATTGCTGTTTTTGACCTAAAGGATGCTTACCCCACTGTGATGGAAGACATGAAGGCTTTGAAAGCTGCAGGGCAGATTTGGCTGCTCTCCAACTTCGATGCACAGGATGACATTGCATACCCGAATGACCCGAAAGTGCACATCAAGGTGGATGATGACCTAAAACAGCTATTTCGGAGTTTTGAGTTGCCTCGTGATATGATTGATATAGAGAAGGATCTTCAAAAGAATGGAATGAAGCCTGCTACCAACACTGCAAAGAGGAGGAGTGCAGCACAAATTGAGGGCATCTCTTCCAACAAGCCCAAGCCTAGGAAGAAGAAGAGTGAAATTAGCAAGAGAACCAAGCTGACCAATGCCCATCTTCCTGAGCTTTTTCAGAACCTTTTAAAGTAA 849 0.4323 MALQQQLDRFKKQQEKCQSTLSSIAASKVGGRKPNTPVVAAVSTNGRNATTGIKFSKDTERLQHINSIRKAPVGAQMKRVIDLLLETRQAFTPEQINEACYVDMGANKDVFDSLRKNPKVNYDGQRFSYKAKYGLKDKTELLQLIRKYPEGIAVFDLKDAYPTVMEDMKALKAAGQIWLLSNFDAQDDIAYPNDPKVHIKVDDDLKQLFRSFELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQIEGISSNKPKPRKKKSEISKRTKLTNAHLPELFQNLLK* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0673 282 Pfam TFIIE beta subunit core domain 75 133 IPR003166 GO:0006367
Tpr3g0673 282 PANTHER BNAA02G21830D PROTEIN 1 280 - -
Tpr3g0673 282 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 61 136 IPR003166 GO:0006367
Tpr3g0673 282 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 280 IPR016656 GO:0005673|GO:0006367
Tpr3g0673 282 MobiDBLite consensus disorder prediction 226 268 - -
Tpr3g0673 282 Pfam TFA2 Winged helix domain 2 136 193 IPR040501 -
Tpr3g0673 282 MobiDBLite consensus disorder prediction 229 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0673 Tpr-Chr3 6517029 6520515 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0673 K03137 - gmx:100802433 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3861 2 41400291 41404744 Tpr3g0673 3 6517029 6520515 PCT