Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3861 ATGGCGTTGCAAGGAAAGCTAGATAGATTCAAAAAGCAGCAAGAGAAATGTGCATCAACGCTATCGAGCATAGCAGCAAGCAAAGCTGCATCATCTGCTGTGCCAAGTCCTCTTGTTCCTGTCAAATTTTCAAATGATACAGAAAGGCTTCAACATATTAATAGTATACGGAAAGCTCCTGTTGGAGCTCAGATGAAGCGTGTTATTGATCTCCTTTTTGAGACTCGGCAGGCTTTAACATTGGAGCAAATAAATGAAACATGTCATGTGGACATGAAAGCTAACAAAGATGTTTTTGACAATATGAGAAAAAATCCTAAAGTAAGATATGATGGAGAAAGATTCTCTTACAAGTCGAAACATTCCCTTCGGGACAAAAAAGAGCTTCTTTTCCTGATACGCAAATTTCCAGAGGGCATTGCTGTTATTGACTTAAAGGATTCATACCCAACTGTGATGGAGGACTTACAGGCTTTGAAAGCTGGTAGGGAGATTTGGCTGCTGTCCAACTTTGATTCACAGGAAGACATTGCCTACCCTAATGATCCTAAAGTGCCTATTAAGGTTGATGATGACCTAAAACTGCTTTTTCGTGGGATTGAATTGCCTCGTGATATGCTTGATATAGAGAGGGATCTCCAGAAAAATGGAATGAAACCTGCTACTAACACTGCAAAGAGGAGAAGTGCAGCACAAATGGAAGGCATTTCATCCAAGCCTAAACCTAAGAAGAAGAAGAATGAAATCACCAAGAGGACCAAGCTGACTAATGCCCATCTTCCAGAGCTTTTTCAGAACTTAAAGAACTCCTGA 813 0.4047 MALQGKLDRFKKQQEKCASTLSSIAASKAASSAVPSPLVPVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLFETRQALTLEQINETCHVDMKANKDVFDNMRKNPKVRYDGERFSYKSKHSLRDKKELLFLIRKFPEGIAVIDLKDSYPTVMEDLQALKAGREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKLLFRGIELPRDMLDIERDLQKNGMKPATNTAKRRSAAQMEGISSKPKPKKKKNEITKRTKLTNAHLPELFQNLKNS* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3861 270 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 268 IPR016656 GO:0005673|GO:0006367
Tpr2g3861 270 MobiDBLite consensus disorder prediction 217 270 - -
Tpr2g3861 270 Pfam TFA2 Winged helix domain 2 124 181 IPR040501 -
Tpr2g3861 270 Pfam TFIIE beta subunit core domain 63 122 IPR003166 GO:0006367
Tpr2g3861 270 PANTHER BNAA02G21830D PROTEIN 1 268 - -
Tpr2g3861 270 PIRSF TFIIE-beta 5 268 IPR016656 GO:0005673|GO:0006367
Tpr2g3861 270 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 49 124 IPR003166 GO:0006367
Tpr2g3861 270 MobiDBLite consensus disorder prediction 217 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3861 Tpr-Chr2 41400291 41404744 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3861 K03137 - gmx:100788089 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3861 2 41400291 41404744 Tpr2g3861 2 41400291 41404744 ECH
Tpr2g3861 2 41400291 41404744 Tpr3g0673 3 6517029 6520515 PCT