Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0602 ATGAATGATAACAATATTGTGCCGAAGCACGAGCGCCGTTGGGCGTCAGATACTGTTCCCGGAAAAGCAACTGTCAGCGCCGGAACATCGCCGGGAACAGAGTCAAGTTTTGGCGCCGATGAGTTTGTTGAAGTCACTCTCGATCTTCGAGACGATGACACAATCGTTCTTCGTAGTGTTGAGCCAGCTGTTATCAATATCGACGATTCCGTCGCCGGAAGCGGTTACGATACTCCGGTGTCTGTTCCTTCGCCGTCGATCCGAAGAACCTCTTCGAGAGGATTCCGGCATTTCTCACAGGAACTGAAAGCCGAAGCGGTTGCTAAAGCCAAGCAATTCTCACAGGAGCTACGGCGATTCTCGTGGAGTCACGGTCATGCTTCACGCACTCTTTCATCTTCCGCTGGTCATACCGGAACCAGCGCCACCGCCGGCGGTGGTTTTGAAACGGCGTTGGCTGCAAGAGCTCTTAGGAAGCAACGCGCGCAGCTTGATCGGACTCGCACCGGTGCTCATAAAGCACTCCGGAGTTTGAAATTCATCAGCAGTAAATCAAACGGCGTTGATGCTTGGAACGAAGTGCTGAAGAATTTCGATAGACTTTCCAAAGACGGTTTTCTTCATCGCGTCGATTTCGGTCAATGCATAGGTATGAAAGATTCAAAGGAATTTGCTCTGGAACTCTTTGATGCTTTGGGTCGGAAACAAAGATTGAAGGTCGATAAGATAAGCAAAGAAGAACTTTATGAATTCTGGTCGCAAATTACTGATCAAAGTTTTGATTCAAGGCTCCAGATCTTCTTCGACATGGTGGACAAGAACGAAGATGGAAGAATCACCGAAGAAGAAGTAAAAGAGATCATCATGTTAAGTGCTTCTGCAAATAAGTTATCTAGACTGCAGGAGCAAGCCGAAGAATATGCAGCTCTGATTATGGAAGAGTTAGACCCTGAGAGACTTGGCTACATTGAGCTATGGCAATTGGAGACACTTCTTTTACAAAAGGACACATATCTCAACTACAGTCAAGCTCTAAGCTATACAAGCCAAGCTCTAAGCCAGAACCTACAGGGGCTAAGAAAGAAAAGTCCTATACGTAGGATGAGCCGCAGATTTCTTTACTATTTGCAAGAGAATTGGAGGAGAATTTGGGTTTTAACATTGTGGGTTTGCATAATGATTGGGCTCTTCACGTGGAAGTTTTTTCAATACAAGAAAAAGGATGCTTTTCATGTCATGGGTTACTGTCTTCTCACAGCCAAAGGTGCAGCTGAGACCCTGAAGTTCAACATGGCACTTATACTCTTTCCTGTCTGTAGAAACACCATAACTTGGCTCAGGTCTACAAAGCTGTCGTATGTTGTACCTTTTGACGATAACATCAACTTCCATAAGACAATTGCTGGGGCAATCGTGATTGGTGTTATACTTCATGTCGGGGATCACCTTGCTTGTGATTTTCCAAGACTTGTAACTGTGTCTGAAGCTGATTATCAGAAGTATTTGAAAGGTGTATTTGGTCATAACAGACCTAGTTATATAGACATAGTTAAAGGGATTGAGGGTGTCACTGGAATTTTGATGGTGGTTTTAATGGCAATTGCATTTACCCTCGCAACAAAATGGTTCAGGAGAAATCTCATTAAGCTGCCTAAACCATTTAGTAGGCTCACTGGTTTCAATGCTTTCTGGTATTCACACCATCTGTTTGTCATTGTCTATGTTCTGCTCATCATCCATGGTGTAAAAATGTACCTTGTGCGCAAATGGCACTCTCAAACGACATGGATGTATCTTGCGGTTCCAATTTTACTCTATGCGTCAGAAAGAACGCTCAGATTATTTCGTTCTGGTCTTTATACAGTCCGTCTAATAAAGGTTGCTATTTATCCTGGAAATGTCCTCACATTGCAAATGTCCAAGCCTCCTCAATTTCGCTATAAGAGTGGACAATACATGTTTGTACAATGCTCTGCCGTGTCTCCGTTTGAGTGGCATCCGTTTTCTATTACCTCAGCCCCTGGGGATGACTTTCTGAGTGTTCACATTCGGCAACTGGGTGACTGGACTCAGGAGCTTAAAAGGGTATTTTCTGAGGCTTGTGAGCCTCCTGTGTCCGGGAGGAGTGGGCTTCTCAGGGCTGATGAAACGACAAAGAAAAGTTTACCAAAGTTAAAGATAGATGGACCTTATGGGGCGCCAGCACAAGACTATAAAAAATATGACGTTTTGTTACTGGTTGGTCTCGGTATAGGAGCAACTCCTTTCATCAGCATTCTGAAAGATCTTCTCAACAACATTATCAAAATGGAGGAGCTGGCGGATTCAGTTTCTGAAACAAGTAGAGCTTCAGATGTCAGTGTTGGGAGTACTGATTCACCGTCGCTTAATAAAATTGCTCCTAAAAGGAAGAAAACACTGAAGACTACCAATGCTTATTTCTATTGGGTTACAAGAGAGCAAGGCTCTTTTGATTGGTTCAAAGGAGTCATGAACGAAGTAGCTGAACTTGATCAAAGGGGTGTCATTGAGATGCACAACTACTTGACTAGCGTATATGAGGAAGGAGATGCTAGATCGGCCCTTATCACCATGGTTCAAGCACTAAACCATGCCAAAAATGGAGTTGATATTGTTTCTGGAACCAGGGTACGGACACATTTTGCTAGGCCTAATTGGAAGAAGGTTTTCTCGAAAATGTGTTCCAAGCACTATAGTGGACGAATAGGGGTGTTTTACTGTGGTGCACCGGTTTTGGCCAAAGAACTTAATAAGTTATGCTTCGAGTTCAACGAAAAGGGTCCAACAAAGTTTGAATTCCACAAGGAGCATTTCTAA 2838 0.438 MNDNNIVPKHERRWASDTVPGKATVSAGTSPGTESSFGADEFVEVTLDLRDDDTIVLRSVEPAVINIDDSVAGSGYDTPVSVPSPSIRRTSSRGFRHFSQELKAEAVAKAKQFSQELRRFSWSHGHASRTLSSSAGHTGTSATAGGGFETALAARALRKQRAQLDRTRTGAHKALRSLKFISSKSNGVDAWNEVLKNFDRLSKDGFLHRVDFGQCIGMKDSKEFALELFDALGRKQRLKVDKISKEELYEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEIIMLSASANKLSRLQEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRKKSPIRRMSRRFLYYLQENWRRIWVLTLWVCIMIGLFTWKFFQYKKKDAFHVMGYCLLTAKGAAETLKFNMALILFPVCRNTITWLRSTKLSYVVPFDDNINFHKTIAGAIVIGVILHVGDHLACDFPRLVTVSEADYQKYLKGVFGHNRPSYIDIVKGIEGVTGILMVVLMAIAFTLATKWFRRNLIKLPKPFSRLTGFNAFWYSHHLFVIVYVLLIIHGVKMYLVRKWHSQTTWMYLAVPILLYASERTLRLFRSGLYTVRLIKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCSAVSPFEWHPFSITSAPGDDFLSVHIRQLGDWTQELKRVFSEACEPPVSGRSGLLRADETTKKSLPKLKIDGPYGAPAQDYKKYDVLLLVGLGIGATPFISILKDLLNNIIKMEELADSVSETSRASDVSVGSTDSPSLNKIAPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKMCSKHYSGRIGVFYCGAPVLAKELNKLCFEFNEKGPTKFEFHKEHF* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0602 945 CDD EFh 223 289 IPR002048 GO:0005509
Tpr3g0602 945 ProSitePatterns EF-hand calcium-binding domain. 272 284 IPR018247 -
Tpr3g0602 945 Gene3D - 732 945 IPR039261 -
Tpr3g0602 945 PANTHER RESPIRATORY BURST OXIDASE2 31 945 - -
Tpr3g0602 945 CDD NOX_Duox_like_FAD_NADP 624 887 - -
Tpr3g0602 945 MobiDBLite consensus disorder prediction 1 37 - -
Tpr3g0602 945 ProSiteProfiles EF-hand calcium-binding domain profile. 259 294 IPR002048 GO:0005509
Tpr3g0602 945 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 738 945 IPR039261 -
Tpr3g0602 945 Coils Coil 760 780 - -
Tpr3g0602 945 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 617 737 IPR017927 GO:0016491
Tpr3g0602 945 SUPERFAMILY Riboflavin synthase domain-like 620 733 IPR017938 -
Tpr3g0602 945 PRINTS Cytochrome B-245 heavy chain signature 523 546 IPR000778 GO:0016020|GO:0016491
Tpr3g0602 945 PRINTS Cytochrome B-245 heavy chain signature 723 736 IPR000778 GO:0016020|GO:0016491
Tpr3g0602 945 PRINTS Cytochrome B-245 heavy chain signature 746 763 IPR000778 GO:0016020|GO:0016491
Tpr3g0602 945 Coils Coil 290 310 - -
Tpr3g0602 945 SFLD NADPH oxidase subgroup (NOX) 109 945 - -
Tpr3g0602 945 SUPERFAMILY EF-hand 191 341 IPR011992 -
Tpr3g0602 945 Pfam Ferric reductase NAD binding domain 741 927 IPR013121 GO:0016491
Tpr3g0602 945 Gene3D - 164 280 - -
Tpr3g0602 945 Pfam FAD-binding domain 621 734 IPR013112 GO:0016491
Tpr3g0602 945 Pfam Ferric reductase like transmembrane component 422 578 IPR013130 -
Tpr3g0602 945 Gene3D Translation factors 608 700 - -
Tpr3g0602 945 MobiDBLite consensus disorder prediction 1 17 - -
Tpr3g0602 945 MobiDBLite consensus disorder prediction 22 36 - -
Tpr3g0602 945 Pfam Respiratory burst NADPH oxidase 163 262 IPR013623 GO:0004601|GO:0050664
Tpr3g0602 945 PANTHER NADPH OXIDASE 31 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0602 Tpr-Chr3 5898017 5908661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0602 12 945 Miscellaneous Gene Families AT1G64060 77.790 0.0 1524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0602 K13447 - gmx:100801077 1687.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0602 3 5898017 5908661 Tpr3g0602 3 5898017 5908661 ECH
Tpr2g3893 2 41677419 41683510 Tpr3g0602 3 5898017 5908661 PCT