Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3893 ATGAATGGTACTCCAAAGCATGAACGCCGTTGGGCGTCCGACACCGTTCTCGCGAATATAACTGTTACCACCAATAATTCACCGGGAACGGAGTCCAATTCCGACACCAACGACGAATATGTTGAGGTCACTCTTGATCTTCATAAAGATGACACCGTCGTTCTCCGCGGCATTGAGCCGGTGGTCTCTACCATTAACCTCGACGGCGGTGTCAACACCACCGTAAATGAAACCACGACATCAACTGCAAGGTCTTCTTCTTCGATGATCAGGAGAAACTCTTCTAGCATGTTGCGACGTTTATCGCATGAGGTGAATGCCAAGGCAAAGCAGTTTTCACAAGAGCTTAAGCGATTCTCATTGAGTCACGCCGTGTCTGATTCGGTATTGGCCGCTCGTGATCTTAGGAAACAACGCGCTCAGCATGATCGAAATCGTTCCTCTACGAAGAAAGCACTCCGTGGATTGAAATTTATTACTAGTAAATCCAATGACGTTGATGCTTGGAATGAGACGCAGAGCAATTTCGATAGATTTGCCAAAGACGGTTTTCTCCATCGTGCCGATTTCGCACAATGCATTGGTATGGGGAATTCTAAGGAGTTTGGTATGGAAATGTTTGATGCCTTGAATCGTAGACGAAGATCAAAGGTTGAAAAGATAAATAGAGACGAGTTTCGTGAATTTTGGACGCAAATTACCGATCAAAGTTTTGATTCGCGGCTCCAAATCTTCTTTGACATGGTGGACAAGAACGAAGATGGTAGAATCACGGAAGAAGACGTGAAAGAGATTATTGTGCTAAGTGCTTCAGCAAATAAGTTGTCCAGATTGAAGGAACAAGCTGGAGAATATGCAGCGCTAATCATGGAAGAGTTAGACCGTGAAAGACTTGGTTACATCGAGCTATGGCAATTGGAGACGCTTCTATTACAAAAGGACACATACCTCAACTACAGCCAGGCTCTAAGCTTCACAAGTCAAACTTTGAGCCAGAACCTACAAGGACTAAGGAAGAAATGTTTGATACGTAGGATGACCCGCAAGTTGCTCTACTATTTGCAAGAAAATTGGAGGAGACTTTGGGTTTTGACACTGTGGATTTCCATAATGATTGGGCTGTTTACATGGAAGTTCATCCAGTACAAGCGAAAAGATGCGTATTATATCATGGGTTATTGTCTACTCATGGCTAAAGGTGGGGCTGAGACCCTGAAGTTCAATATGGCTCTTATACTCTTGCCTGTATGCAGAAACACCATAACTTGGCTTAGGTCTACCAAACTGGCCTACATTGTACCTTTTGATGATAACATCAACTTTCATAAGACAATTGCTGCGGCCATAGTCATTGGAGTTATACTTCATGTCGGGAGTCACCTTGCATGTGATTTCCCAAGACTTGTAAATTCCTCTGAAGATGAGTATAAAAAGTATTTAAATGGCGTATTTGGTGATAGTGCACCCAGTTACGGAGACCTTGTTAAAGGGATAGAGGGTGTGACTGGAATTTTGATGGTCGTTTATATGGCCATTGCATTTATAATTGCAACAAAATGGTTCAGGAGAAATCTCATTAATCTACCTAGACCATTTAATAGGCTTACAGGTTTCAATGCCTTCTGGTATTCACACCATTTATTTGTCATTGTCTATGTCCTTCTCATCATTCACGGTGCAAACCTTTACCTCGTGCGCAAATGGGTCCATCAAACGACATGGATGTATCTTGCAATTCCAATTTTACTTTATGCGGGAGAAAGAACACTCAGATTCTTTCGTTCTGGTTTCAACACAGTCCGAATTATAAAGGTTGCAATCTATCCTGGAAATGTTCTCACATTGCAAATGTCGAAACCACCCCAATTTCGTTACAAGAGCGGACAATACATGTTTGTACAATGTCCTGCTGTTTCTCCATTTGAGTGGCATCCGTTTTCTATTACCTCATCCCCTGGTGATGACTACCTGAGTGTTCACATCCGACAACTGGGAGATTGGACTTCTGAGCTTAAAAGGGTATTCTCTGAGGCCTGTGAGCCTCCCTTAGCCGGGTTGAGCGGTCTTCTCAGGGCTGATGAAACCACCAAGAAAAGTTTACCCAAGCTAAGGATAGACGGACCTTACGGCGCACCAGCACAGGACTATGCAAAATATGATGTCCTGTTACTTGTGGGTCTTGGAATAGGAGCAACACCTTTTATCAGCATCCTAAAAGATCTTCTCTATAACATTGTCAAAATGGAGAACCAAGCGGAATCAGTTTCTGAATCAAGTAGAGGTTCAAACTCCACCGTTAGGAGCTCAGATCCACTGTTTCGTAATAAAGTTTCTTCTAAACGGAAGAAAACACTGAAGACTACCAACGCTTATTTCTACTGGGTAACAAGAGAACAAGGTTCTTTCGATTGGTTTAAAGGGGTCATGAATGAAGTTGATGAAATAGATAAGAAGGGAGTTATTGAGATGCACAACTACTTGACCAGTGTATACGAGGAAGGAGATGCCAGATCTGCCCTCGTCACCATGGTGCAAGCCCTTAACCATGCCAAAAATGGAGTTGATATTGTTTCTGGGACTCGGGTGCGAACTCATTTTGCAAGGCCTAGATGGAAGAAGGTTTTCTCTAAAATGTGTTCTAAGCATTGTAATAAACGAATAGGGGTATTTTATTGTGGAGCACCAATTTTGGCCAAAGAATTGAGCAAGCTTTGTTTCGAGTTCAACAAAAATGGTGCAACAAAATTTGAGTTCCACAAGGAACATTTCTAA 2772 0.4253 MNGTPKHERRWASDTVLANITVTTNNSPGTESNSDTNDEYVEVTLDLHKDDTVVLRGIEPVVSTINLDGGVNTTVNETTTSTARSSSSMIRRNSSSMLRRLSHEVNAKAKQFSQELKRFSLSHAVSDSVLAARDLRKQRAQHDRNRSSTKKALRGLKFITSKSNDVDAWNETQSNFDRFAKDGFLHRADFAQCIGMGNSKEFGMEMFDALNRRRRSKVEKINRDEFREFWTQITDQSFDSRLQIFFDMVDKNEDGRITEEDVKEIIVLSASANKLSRLKEQAGEYAALIMEELDRERLGYIELWQLETLLLQKDTYLNYSQALSFTSQTLSQNLQGLRKKCLIRRMTRKLLYYLQENWRRLWVLTLWISIMIGLFTWKFIQYKRKDAYYIMGYCLLMAKGGAETLKFNMALILLPVCRNTITWLRSTKLAYIVPFDDNINFHKTIAAAIVIGVILHVGSHLACDFPRLVNSSEDEYKKYLNGVFGDSAPSYGDLVKGIEGVTGILMVVYMAIAFIIATKWFRRNLINLPRPFNRLTGFNAFWYSHHLFVIVYVLLIIHGANLYLVRKWVHQTTWMYLAIPILLYAGERTLRFFRSGFNTVRIIKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSSPGDDYLSVHIRQLGDWTSELKRVFSEACEPPLAGLSGLLRADETTKKSLPKLRIDGPYGAPAQDYAKYDVLLLVGLGIGATPFISILKDLLYNIVKMENQAESVSESSRGSNSTVRSSDPLFRNKVSSKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVDEIDKKGVIEMHNYLTSVYEEGDARSALVTMVQALNHAKNGVDIVSGTRVRTHFARPRWKKVFSKMCSKHCNKRIGVFYCGAPILAKELSKLCFEFNKNGATKFEFHKEHF* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3893 923 ProSitePatterns EF-hand calcium-binding domain. 250 262 IPR018247 -
Tpr2g3893 923 PANTHER RESPIRATORY BURST OXIDASE2 29 923 - -
Tpr2g3893 923 Gene3D - 142 258 - -
Tpr2g3893 923 Gene3D Translation factors 587 677 - -
Tpr2g3893 923 CDD EFh 220 266 IPR002048 GO:0005509
Tpr2g3893 923 CDD NOX_Duox_like_FAD_NADP 602 865 - -
Tpr2g3893 923 Pfam Respiratory burst NADPH oxidase 143 240 IPR013623 GO:0004601|GO:0050664
Tpr2g3893 923 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 595 715 IPR017927 GO:0016491
Tpr2g3893 923 Gene3D - 710 923 IPR039261 -
Tpr2g3893 923 Pfam FAD-binding domain 598 712 IPR013112 GO:0016491
Tpr2g3893 923 Pfam Ferric reductase like transmembrane component 400 556 IPR013130 -
Tpr2g3893 923 PRINTS Cytochrome B-245 heavy chain signature 501 524 IPR000778 GO:0016020|GO:0016491
Tpr2g3893 923 PRINTS Cytochrome B-245 heavy chain signature 701 714 IPR000778 GO:0016020|GO:0016491
Tpr2g3893 923 PRINTS Cytochrome B-245 heavy chain signature 724 741 IPR000778 GO:0016020|GO:0016491
Tpr2g3893 923 SFLD NADPH oxidase subgroup (NOX) 69 923 - -
Tpr2g3893 923 ProSiteProfiles EF-hand calcium-binding domain profile. 237 272 IPR002048 GO:0005509
Tpr2g3893 923 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 718 923 IPR039261 -
Tpr2g3893 923 PANTHER NADPH OXIDASE 29 923 - -
Tpr2g3893 923 SUPERFAMILY EF-hand 167 320 IPR011992 -
Tpr2g3893 923 MobiDBLite consensus disorder prediction 754 773 - -
Tpr2g3893 923 Pfam Ferric reductase NAD binding domain 719 905 IPR013121 GO:0016491
Tpr2g3893 923 SUPERFAMILY Riboflavin synthase domain-like 599 712 IPR017938 -
Tpr2g3893 923 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3893 Tpr-Chr2 41677419 41683510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3893 9 923 Miscellaneous Gene Families AT1G64060 70.594 0.0 1395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3893 K13447 - gmx:100805517 1484.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3893 2 41677419 41683510 Tpr3g0602 3 5898017 5908661 PCT