Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0563 ATGGATGATTGTCCTGCAAAATTAAAAATCATCCCCGACCACTTTCAAATTCCAACATCAAGAGTAGAATCTTCTGAGAGCAGAGAATTATCTACTACTGAAGAACCTAGAATTGATCAATCTTTAAGGCCCTCACTCCAGCTGTGGACTCGAAGAAAATTTAGGACAACTTTCATGTTGAACTTGTTTACTCTGCGAAAACTTTCATGGGGGTCTGATACTGGAGGTCAGGAAAAGGTTGAGCTAACAGCTGCAGAATTAGAGTCACTTCGATCGGAGCTTGCTGATTTAGAGGAAAAGGAAGCTCACTTAAAAGCTCAGTTGCAACATATAGATGAAGTTCTGCGATCAGCTCGTCTCTCTGGCTATTTACAAATTAGAACTAGATGGACAGCACTTCCGGGAGAACCCCCACCTATAGACGATACTGAAGTAGATGATTGGCTTCCTCGCTTTGTCGTTCTTCATGGAGCATGTATATTCTTATATTTCTTGTCTACAGATATAAGTCCTCAGGACTCAACCCTTCTATCGGATATTCTTGAAGTAGGGAGATTGCCGTGTTTTAAGCGTGAAAATGATGAAATTCAACATGCCTTTTATATTTTAACTCGTCATGGATATCGCTATGAGTGCTCAAGCAGTTCTATGATACAGGTGGACTCTTGGTTAACAGCTTTACAAAGTTACAGCAAACTAGAATCTGATAAACCAGTTCCTAATGGTTCGATTGAGATGCAACACAGTTGA 750 0.4027 MDDCPAKLKIIPDHFQIPTSRVESSESRELSTTEEPRIDQSLRPSLQLWTRRKFRTTFMLNLFTLRKLSWGSDTGGQEKVELTAAELESLRSELADLEEKEAHLKAQLQHIDEVLRSARLSGYLQIRTRWTALPGEPPPIDDTEVDDWLPRFVVLHGACIFLYFLSTDISPQDSTLLSDILEVGRLPCFKRENDEIQHAFYILTRHGYRYECSSSSMIQVDSWLTALQSYSKLESDKPVPNGSIEMQHS* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0563 249 CDD PH 148 227 - -
Tpr3g0563 249 ProSiteProfiles PH domain profile. 117 232 IPR001849 -
Tpr3g0563 249 Gene3D - 101 233 IPR011993 -
Tpr3g0563 249 PANTHER OS05G0595500 PROTEIN 1 245 - -
Tpr3g0563 249 SUPERFAMILY PH domain-like 112 231 - -
Tpr3g0563 249 SMART PH_update 118 234 IPR001849 -
Tpr3g0563 249 PANTHER OS05G0595500 PROTEIN 1 245 - -
Tpr3g0563 249 Coils Coil 80 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0563 Tpr-Chr3 5577085 5580296 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0563 - K00940 cam:101499802 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0563 3 5577085 5580296 Tpr3g0563 3 5577085 5580296 ECH
Tpr2g3920 2 41901173 41903735 Tpr3g0563 3 5577085 5580296 PCT