Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3920 ATGAGTACCTACCTTCGTTCTCTCTTCCTCCTACACCAACCACTGGTACAGGTTGAATTAACATCCGCAGAAGTAGAGTCTCTTCGATCAGAACTTGCTGATTTAGAAGAGAAGGAAGCTCAATTAAAAGCTCAGTTGGAAAATATTGATGAAATTTTACGATCAGCTCGTCTATCTGGATATTTGTACATCCGAACTAGATGGGCGGCACTTCCGGGAGAAACTCCACCTATTGATGATACCGATGTAGATGATTGGCTTCCTCGCTTCGTTGTTCTTCAGGGTGAATGTCTATTCTTATATTTGTTGTGTACAGACTTAAGTCCTCAAGACTCGACGCTTCTATCTGACATTATTGAAGTAAACCAATTACCAAGTTTTAAGCGTGAAGATAGTGAGATGAGATACGCCTTTTGTATTTTAACTCGACATGGATTGCGATATGAATGCTCAAGCAGTTCTAAGATACAGGTGGACTCGTGGTTATCGGCTCTACAATCTGACTGCAAACTGGAATCTGATACATCAACTTCCAATGGTTCAATATAG 549 0.4062 MSTYLRSLFLLHQPLVQVELTSAEVESLRSELADLEEKEAQLKAQLENIDEILRSARLSGYLYIRTRWAALPGETPPIDDTDVDDWLPRFVVLQGECLFLYLLCTDLSPQDSTLLSDIIEVNQLPSFKREDSEMRYAFCILTRHGLRYECSSSSKIQVDSWLSALQSDCKLESDTSTSNGSI* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3920 182 Coils Coil 18 55 - -
Tpr2g3920 182 Gene3D - 53 179 IPR011993 -
Tpr2g3920 182 ProSiteProfiles PH domain profile. 55 170 IPR001849 -
Tpr2g3920 182 SMART PH_update 56 172 IPR001849 -
Tpr2g3920 182 SUPERFAMILY PH domain-like 49 167 - -
Tpr2g3920 182 PANTHER OS05G0595500 PROTEIN 17 181 - -
Tpr2g3920 182 PANTHER OS05G0595500 PROTEIN 17 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3920 Tpr-Chr2 41901173 41903735 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3920 - - ccaj:109810881 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3920 2 41901173 41903735 Tpr2g3920 2 41901173 41903735 ECH
Tpr2g3920 2 41901173 41903735 Tpr3g0563 3 5577085 5580296 PCT