Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0551 ATGGCTTCTGAGAGGGAAAGTTTTGACCTCTCAGGACCTTTGCATTTGACTTATGTCTTATGGGACAATCCATATCATCGAATGTCAGTTGCTGCTTGTTTAGTCCAAGGTGTTTATATTCTAGAAAGGGACCGGCAAGAAAAACGTGAAGGTTCGGATGCTCTAGCCCCGCCTTGGTGGACATTTTTCCATTTTCAGCTGCTTCGACCACTTGTAGATGATGTTGATTCTTCCATCTTTGGTGCAATCTATGAGTTCAAGCCTCCATCTTCACAAAGTAACGACACTTTATATCGAAGTCCACGTTACGTGATTGCCTTTCGAGGAACTCTAACAAAAGCACACTCAGTTTCACGTGATGTTGAGTTAGATATCCACTTCATCCGACAAGGTCTTCATAAAACTTCGCGCTCTAACATAGCTATTCAAGCCGTTCGAAACACGGTAGCAACCGTAGGTGATTCAAATGTTTGGTTGGCTGGACACTCCCTAGGATCAGCGATGGCGTTGCTTACCGGGAAAACCATGGCAAAGGATGGCAATTTTATCGAATCCTTTCTTTTCAACCCTCCGTTCACATCTGCTCCACTTGAGAAGATTAAGGATGAGAGAGTCAAACATGGCATTCGATTTGCTGGCAGTGTGATAACAGCTGGACTCACCATAGCTATGAAAGCAAAGCAAGCAAAGCAGCAGCCGAAGGATTTATTTATCGATCCATTTACTGCTTTGTCTGCGTGGGTCCCATGTTTGTTTGTGAATCCATCTGATCATATATGTTCAGAGTATATTGGATACTTTGAACATAGGAGAAATATGGAGGATATGGGCGCGGGAGTGATTGAAAGGTTAGCAACTCAAAACTCACTCGGTAGTTTACTGATGGGTGCGTTCGGGAACGACTCTGAACCATCTGAACCACTGCACCTCATTCCTTCAGCTTCTCTGACAATCAATGTTGCTCCTTCTGATTTCAAAGAAGCTCATGGGATTCATCAGTGGTGGAAACCTGACTTGAGACTTGATCAGAAGCTCTACAATTACAAATAG 1050 0.4362 MASERESFDLSGPLHLTYVLWDNPYHRMSVAACLVQGVYILERDRQEKREGSDALAPPWWTFFHFQLLRPLVDDVDSSIFGAIYEFKPPSSQSNDTLYRSPRYVIAFRGTLTKAHSVSRDVELDIHFIRQGLHKTSRSNIAIQAVRNTVATVGDSNVWLAGHSLGSAMALLTGKTMAKDGNFIESFLFNPPFTSAPLEKIKDERVKHGIRFAGSVITAGLTIAMKAKQAKQQPKDLFIDPFTALSAWVPCLFVNPSDHICSEYIGYFEHRRNMEDMGAGVIERLATQNSLGSLLMGAFGNDSEPSEPLHLIPSASLTINVAPSDFKEAHGIHQWWKPDLRLDQKLYNYK* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0551 349 Pfam Lipase (class 3) 123 181 IPR002921 GO:0006629
Tpr3g0551 349 PANTHER LIPASE CLASS 3-LIKE 2 348 - -
Tpr3g0551 349 Gene3D alpha/beta hydrolase 77 210 IPR029058 -
Tpr3g0551 349 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 348 - -
Tpr3g0551 349 SUPERFAMILY alpha/beta-Hydrolases 18 203 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0551 Tpr-Chr3 5487055 5490092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0551 1 279 Acyl Lipid Metabolism Gene Families AT2G05260 60.000 6.75e-119 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0551 - - gmx:100811139 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0551 3 5487055 5490092 Tpr3g0551 3 5487055 5490092 ECH
Tpr2g3933 2 41968856 41970301 Tpr3g0551 3 5487055 5490092 PCT