Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3933 ATGCCCTCTGAAAGTACTGACAATTTTTACAGCTCTGGACCCTCACATCTAACTTATGTCAATTGGGATAATGAATATCATCGAAAATCAGTAGCTTCTAGTTTGGTCAATGGTGTTTATGTTCTAGAAAATGACCGCCAAAAACAACGAAAAGGTTCCGATTCACTAGCATGTAAATGGTGGGAATTCTTCCATTTTAAGCTGCTTGATACACTTATTGATGATGTTGATAGTTCCATATTTGGTGCAATTTATGAGTTCAAGCCTCAACCATCAATGTACAACGACACCTTACACAAAAGCCCGCGATATGTAATTGCGTTTCGAGGGACTACAATTAAACCAGAGTCATTTTTGCGCGATATGGAGTTGGATCTAACAATTCTCAGACATGGACTTCATCTAACATCACGTGCGAAGATAGCTACCGAAGCTGTAAGAAAGACGGTACTGGATAGGGTTGGTGGTAATGGTTCCAAGATATGGTTGGCTGGTCATTCTCTAGGATCAAGCATCGCTTTGCATGCCGGCAAAATAATGGCTAAAAGTGACATTGAATCTTTTCTTTTCAACCCTCCATTTCCATCTGCTCCAATTAATCAGATTATTAAGAGTAAGAAATTGAAACAGGGGATTCGATTTGGTGGCAGCGTGGTAAAACTTGGAGTCGGCTTTATTACTCTGGATTCAGATAAGAGAAGATCGTCCAATGATTCATTTTCTGCTTTGTCTGGTTGGATTCCAAACTTATTTGTGAATCCATCTGACTATATATGTTCGGAGTATGTTGCATACTTCGAACATAGAAGCAAAATGAAGAAATATGGTGCTGGTTGGATTGAAAAGAGAGCAACACAAATCTCAGTTGGTTGTGAATTCATGAGAGCTGTAGGGATGGAATCTGAACCTCTGCATCTCATTCCTTCAGCTAATTTGACAGTGAATTTAACCCGTCAGAAGAATCGCATAAAAGCACATGGAATTGACCAGTGGTGGAAACCAAACTTACAGTTGAAATCCGAGAAGCACAAATACAAATACTAG 1044 0.3937 MPSESTDNFYSSGPSHLTYVNWDNEYHRKSVASSLVNGVYVLENDRQKQRKGSDSLACKWWEFFHFKLLDTLIDDVDSSIFGAIYEFKPQPSMYNDTLHKSPRYVIAFRGTTIKPESFLRDMELDLTILRHGLHLTSRAKIATEAVRKTVLDRVGGNGSKIWLAGHSLGSSIALHAGKIMAKSDIESFLFNPPFPSAPINQIIKSKKLKQGIRFGGSVVKLGVGFITLDSDKRRSSNDSFSALSGWIPNLFVNPSDYICSEYVAYFEHRSKMKKYGAGWIEKRATQISVGCEFMRAVGMESEPLHLIPSANLTVNLTRQKNRIKAHGIDQWWKPNLQLKSEKHKYKY* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3933 347 SUPERFAMILY alpha/beta-Hydrolases 48 203 IPR029058 -
Tpr2g3933 347 PANTHER LIPASE CLASS 3-LIKE 6 345 - -
Tpr2g3933 347 Gene3D alpha/beta hydrolase 25 200 IPR029058 -
Tpr2g3933 347 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 6 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3933 Tpr-Chr2 41968856 41970301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3933 3 339 Acyl Lipid Metabolism Gene Families AT5G24180 45.376 6.20e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3933 - - gmx:100786952 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3933 2 41968856 41970301 Tpr2g3933 2 41968856 41970301 ECH
Tpr2g3933 2 41968856 41970301 Tpr3g0551 3 5487055 5490092 PCT