Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0439 ATGGAGAATACGCTTAAGCCTTTGAGAGATGGTGAGTGTGTGCTGGATGTCCTCAGCCCAAGATCCACCCCAAGACCCACCGTAGCTGGCGGTGTTGAGGATGTCTACGGCGAAGATCGTGCCACGGAGGACCAACTCGTCACCCCTTGGACTTTCTCTGTTGCCAGTGGCTACTCTTTGCTGAGAGATCCACAATACAACAAAGGGCTTGCTTTCACTGAGAAAGAGAGGGATGCACATTATTTGCGTGGCCTCTTACCTCCTACCGTCAGCTCTCAGCAACTTCAGGGGAAGAAACTTATGCACAACATCCGTCAATATGAAGTTCCTTTGCAGAAGTACACGGCCATGATGGACCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAACTTCTTATTGATAATGTTGAGGAATTGCTCCCAATTGTATATACTCCGGTCGTCGGTGAGGCTTGCCAGAAATATGGTAGCATATTCAAGCGTCCTCAGGGTCTATACATTAGTTTGAAAGAGAAGGGAAAAATTCTTGAGGTTTTGAAAAACTGGCCGGAGAGGAGTATTCAAGTTATTGTTGTAACTGATGGTGAGCGGATTTTGGGACTTGGCGATCTTGGATGCCAGGGTATGGGAATTCCTGTTGGTAAATTGGCTTTGTATACGGCACTAGGAGGAGTTCGTCCTTCAGCATGTTTACCAGTTACAATTGATGTGGGAACAAATAATGAGAAATTACTGAATGACGAGTTCTACATTGGGCTTAGACAAAAGAGGGCAACTGGGAAGGAATACTATGACCTTCTGCACGAGTTCATGAGTGCAGTGAAGCAAAACTACGGCGAAAAAGTTCTTGTTCAGTTTGAAGATTTTGCAAATCACAATGCTTTTGAGTTGCTTGCAAAATACGGTACAACTCATCTTGTTTTCAATGACGATATACAGGGGACTGCAGCTGTTGTTCTAGCTGGAGTTGTAGCAGCCCTGAAGCTCATTGGTGGTACCCTACCTGACCATAAATTCCTCTTCCTTGGTGCTGGAGAAGCAGGAACTGGTATAGCAGAGCTAATTGCTCTTGAGATATCAAAACAGACTAAAGCACCTATTGAAGAGAGTCGTAAGCAGATATGGCTGGTAGACTCAAAGGGTTTAATTGTTAGTTCACGTGCGAATTCACTTCAACACTTCAAGAAGCCTTGGGCTCACGAACACGAGCCTGTTGGCACTCTCATAGAGGCCGTTAAGGTAATCAAGCCTACAGTTCTGATTGGATCATCAGGAGTGGGGAAAACATTTACAAAGGAAGTAGTTGAGGCCATGACAGCAAACAATAAAATTCCTCTCATTTTGGCTCTTTCCAACCCAACCTCACAATCTGAGTGTACAGCTGAAGAGGCATACACATGGAGCGAGGGTCGTGCAATTTTTGCTAGCGGGAGTCCATTTGATCCTGTTGAATACAATGGCAAAACTTATTATTCTGGCCAGTCCAACAATGCTTATATTTTCCCGGGTTTTGGTTTGGGTTTAGTAATGTCTGGAGCAATCCGAGTGCATGATGATATGCTTCTAGCAGCCTCGGAAGCTTTGGCGAACCAAGTGACAGAGGAGAGCTACAAAAAGGGCATGACTTACCCACCTTTCACTGATATCAGAAAAATTTCTGCCAACATAGCTGCAAATGTTGCTGCCAAGGCATATGAACTAGGCTTGGCTACACATCTTCCTCGTCCTGAGAATCTTGTCAAGTATGCTGAGAGTTGCATGTATACTCCTTTATACCGCAACTATAGGTGA 1791 0.4478 MENTLKPLRDGECVLDVLSPRSTPRPTVAGGVEDVYGEDRATEDQLVTPWTFSVASGYSLLRDPQYNKGLAFTEKERDAHYLRGLLPPTVSSQQLQGKKLMHNIRQYEVPLQKYTAMMDLQERNERLFYKLLIDNVEELLPIVYTPVVGEACQKYGSIFKRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPVTIDVGTNNEKLLNDEFYIGLRQKRATGKEYYDLLHEFMSAVKQNYGEKVLVQFEDFANHNAFELLAKYGTTHLVFNDDIQGTAAVVLAGVVAALKLIGGTLPDHKFLFLGAGEAGTGIAELIALEISKQTKAPIEESRKQIWLVDSKGLIVSSRANSLQHFKKPWAHEHEPVGTLIEAVKVIKPTVLIGSSGVGKTFTKEVVEAMTANNKIPLILALSNPTSQSECTAEEAYTWSEGRAIFASGSPFDPVEYNGKTYYSGQSNNAYIFPGFGLGLVMSGAIRVHDDMLLAASEALANQVTEESYKKGMTYPPFTDIRKISANIAANVAAKAYELGLATHLPRPENLVKYAESCMYTPLYRNYR* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0439 596 PIRSF ME 29 596 IPR001891 GO:0004470|GO:0004471
Tpr3g0439 596 Pfam Malic enzyme, NAD binding domain 312 564 IPR012302 GO:0051287
Tpr3g0439 596 PANTHER MALIC ENZYME-RELATED 26 596 - -
Tpr3g0439 596 Gene3D - 55 309 IPR037062 GO:0004471
Tpr3g0439 596 PANTHER MALIC ENZYME 26 596 - -
Tpr3g0439 596 SMART Malic_M_2 312 565 IPR012302 GO:0051287
Tpr3g0439 596 SMART malic_2 121 302 IPR012301 GO:0004471
Tpr3g0439 596 Pfam Malic enzyme, N-terminal domain 121 301 IPR012301 GO:0004471
Tpr3g0439 596 PRINTS Malic enzyme signature 127 151 IPR001891 GO:0004470|GO:0004471
Tpr3g0439 596 PRINTS Malic enzyme signature 187 216 IPR001891 GO:0004470|GO:0004471
Tpr3g0439 596 PRINTS Malic enzyme signature 223 245 IPR001891 GO:0004470|GO:0004471
Tpr3g0439 596 PRINTS Malic enzyme signature 283 301 IPR001891 GO:0004470|GO:0004471
Tpr3g0439 596 PRINTS Malic enzyme signature 308 324 IPR001891 GO:0004470|GO:0004471
Tpr3g0439 596 PRINTS Malic enzyme signature 339 355 IPR001891 GO:0004470|GO:0004471
Tpr3g0439 596 PRINTS Malic enzyme signature 442 458 IPR001891 GO:0004470|GO:0004471
Tpr3g0439 596 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 312 595 IPR036291 -
Tpr3g0439 596 Gene3D - 310 596 - -
Tpr3g0439 596 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 33 311 IPR046346 -
Tpr3g0439 596 ProSitePatterns Malic enzymes signature. 308 324 IPR015884 GO:0004471
Tpr3g0439 596 CDD NAD_bind_1_malic_enz 312 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0439 Tpr-Chr3 4557012 4562383 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0439 K00029 - gmx:100782096 1057.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0439 3 4557012 4562383 Tpr5g2490 5 46591347 46597390 ECH
Tpr3g0439 3 4557012 4562383 Tpr7g4882 7 56771837 56776759 ECH
Tpr3g0439 3 4557012 4562383 Tpr7g0386 7 3211384 3215943 ECH
Tpr3g0439 3 4557012 4562383 Tpr3g0439 3 4557012 4562383 ECH