Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0104 ATGTCTCAGAGCTCTGAGGAGGATACTGATATAAGTGATTCTGAGATAAGTGAGTATGAAGATAAATGTTATGAAGAACTGAAAAATGGAAGTCAGAATGTGAAAACCTCAGACGAGAAGTTCACTTGTCCATACTGCCCTAAGAAAAGAAAACGGGATTATATGTACAAGGAACTCCTGCAACATGCTTCTGGGGTGGGTCAGAGTAGTTCCCAAAAGAGAAAGGCAAGAGAAAAGGCTACTCATTTGGCTTTAGTGAAATATTTGGAAAAGGATCTTATGAATATAGATGAGACTCCATCAGAACCAGCTGATAAAAGTGACACTCCTATTGATTCTGATGAACAGTTTGTGTGGCCTTGGATTGGAATTGTAGTTAATATTCCCACTAGCCGGACACCAGATGGACGCACTGTTGGGGCGAGTGGTTCCAAGCTTAGGGATGAGTACAGACGTAGGGGTTTCAATCCATTTCGAGTCAACCCTCTATGGAATTTCCGAGGTCACACTGGAACTGCCCTTGTGGAATTCAATAAAAACTGGCCTGGCTTCGATAATGCACTCGCATTTGAAAAAGCATATGCATTAGAACATCATGGGAAAAAGGATTGGTTAATTATAGCTAGTTCACAGCAGAAGTCGGGTCTTTATGCATGGGTTGCCCGAGCAGATGACTACAAAGCAAACAATATCATTGGGGAACATCTGCGAAAGATGGCCGATCTCAAAACCATACCAGAACTTATGGAAGAAGAAGCTCGAAGGCAGGATAAACTTGTGTCCAATTTGCACAACATTATTCAAGTAAAAAACAAGCACTTAAATGAGATAGAAGCAAGATGCACTGAGACTGCGCACAAAATGATTACTGCTATGACAGAAAAAGATGAGCTCGTTCAATCTTATAATGAAGAGATAAAGAAAATACAGTCAAGTGCTAAGGATCATTTCCAAAGAATTTTTAATGATCACGAAAAGCTTAAAATGCAACTGGAAACTCAGAAAAAAGAGCTCGAGACACGGAGACTTGCATTGGAAAAGCGTGAAGCACATAATGAAAGTGAAAGAAAAAAGTTGGCAGAAGAGATTGAAGAGAATACAACGAAAAATAGCTCTCTTCAGATGGCTTCTCTGGAGCAATTGAAAGCTGATGAAAATGTTATGAAACTGGCTGAAGATCAAAAGATACAAAAAGAGAAACTCCATGCTAAAATCATTCAGCTTGAGAAAAAACTGGATATGAAACAAAAGCTGGAATTGGAGATTCAGCAACTAAAAGGATCACTTAGTGTGTTGAAGCACATAGAAGATGATGATGATGTAGAAGTTTTGAAGAAGGTGGATGATTTGCATATGGGTTTAAGAGAGAAGGAACAGACACTTCAAGACTTAGATGCACTGAACCAAACACTAATCATTAAGGAGCGTAAGAGTAATGATGAACTGCAGGAAGCTCGAAAAGAATTGATTAATGGCATTAAAGAGATAGCAACTCGAGCCCATATTGGTGTGAAGAGAATGGGGGAACTTGACACTGGACCATTCCATGAAGCTATGCAGAAAAGATATAACGAGGAGGAAGCCGAGGACAAAGCTACAGAACTATGTTCATTGTGGGAAGAGTATCTAAAAGACCCTGATTGGCATCCATTCAAAGTTGTCATGGTTGATGGGAAAGAAAAGGAAATCATTAAAGATGACGATGAAAAGCTGAATGGGCTGAGAAAAGATTTGGGTGAAAAGCCATATAAAGCAGTGGTGGCAGCTTTAACGGAAATTAATCAATATAATCCCAGTGGCCGATATGTAACCTCGGAATTATGGAACTATAAAGCGGGAAGGAGAGCAACTTTGCAAGAAGGAGTGCAGTTTTTGTTGAACCATTGGAAACGCAAGAAAGAAATGTTCTCGTGA 1914 0.3966 MSQSSEEDTDISDSEISEYEDKCYEELKNGSQNVKTSDEKFTCPYCPKKRKRDYMYKELLQHASGVGQSSSQKRKAREKATHLALVKYLEKDLMNIDETPSEPADKSDTPIDSDEQFVWPWIGIVVNIPTSRTPDGRTVGASGSKLRDEYRRRGFNPFRVNPLWNFRGHTGTALVEFNKNWPGFDNALAFEKAYALEHHGKKDWLIIASSQQKSGLYAWVARADDYKANNIIGEHLRKMADLKTIPELMEEEARRQDKLVSNLHNIIQVKNKHLNEIEARCTETAHKMITAMTEKDELVQSYNEEIKKIQSSAKDHFQRIFNDHEKLKMQLETQKKELETRRLALEKREAHNESERKKLAEEIEENTTKNSSLQMASLEQLKADENVMKLAEDQKIQKEKLHAKIIQLEKKLDMKQKLELEIQQLKGSLSVLKHIEDDDDVEVLKKVDDLHMGLREKEQTLQDLDALNQTLIIKERKSNDELQEARKELINGIKEIATRAHIGVKRMGELDTGPFHEAMQKRYNEEEAEDKATELCSLWEEYLKDPDWHPFKVVMVDGKEKEIIKDDDEKLNGLRKDLGEKPYKAVVAALTEINQYNPSGRYVTSELWNYKAGRRATLQEGVQFLLNHWKRKKEMFS* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0104 637 MobiDBLite consensus disorder prediction 346 371 - -
Tpr3g0104 637 MobiDBLite consensus disorder prediction 346 365 - -
Tpr3g0104 637 CDD RRM_like_XS 117 226 IPR005380 GO:0031047
Tpr3g0104 637 Coils Coil 391 435 - -
Tpr3g0104 637 Pfam XH domain 505 633 IPR005379 -
Tpr3g0104 637 Pfam XS domain 114 227 IPR005380 GO:0031047
Tpr3g0104 637 PANTHER RIBONUCLEASE P SUBUNIT P38 49 633 IPR045177 GO:0080188
Tpr3g0104 637 PANTHER RIBONUCLEASE P SUBUNIT P38 1 49 IPR045177 GO:0080188
Tpr3g0104 637 Coils Coil 454 499 - -
Tpr3g0104 637 Gene3D XS domain 110 282 IPR038588 -
Tpr3g0104 637 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 1 49 - -
Tpr3g0104 637 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 49 633 - -
Tpr3g0104 637 Coils Coil 321 365 - -
Tpr3g0104 637 Pfam XS zinc finger domain 43 86 IPR005381 GO:0031047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0104 Tpr-Chr3 1339264 1345942 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0104 - - gmx:100812353 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0104 3 1339264 1345942 Tpr4g3188 4 37720711 37729371 PCT