Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0077 ATGGGACAATTAAAGATGCAAATGCCAGCTGGTCTCAATAATGGAATAGAGGATCAATTTGAGCAATGTGATGCTGGATATCCTAACAAAACTACTATAGCATGCATGATCAATGCAGAAATTGGTTCTGTTTTGGCAGTCATGCGAAGAAATGTTAGATGGGGAGTTCATTACATGTCAGATGATGACCAATCAGAGCACTTCCTTGTTCAGTCTTTGAAGACACTAAGAAGACAAATTTTCTCATGGCAGGATCAATGGCATTCCATTAATCCTGCCTTGTATCTCCAACCTTTTCTTGATGTAATTCAATCAGATGAAACCGGCGCACCGATTACTGGTGTTGCTCTGTCATCAGTTTACAAGATCTTAACTCTGGACGTGATTGAGCAAAATACCGTCAATGTTATCGATACCATGGACTTGGTGGTTGATGCTGTCACAAGTTGCAGATTTGAGGTGACTGATCCTGGATCAGAAGAAGTGGTATTAATGAAGATTTTACAAGTTCTTCTTGCCTGTGTGAAAAGTAAAGCGTCTGTAATACTTAGTAACCAACACATTTGCACTATAGTAAATACTTGCTTCCGTATAGTTCATCAAGCCGGAACCAAAGGGGAGCTGTTGCAGCGGATAGCTCGATACACAATGCATGAACTTGTTAGGTGTATATTCTCCCACCTCCAAGAGATTGACATTACCGAGAGTCCAAAACAAGAGACCTGTGAGCTAAATAATGAACATGCTTCGGCAAGCAGACAATTTGAAAATGGGAGCCTCAACTCTGCATATGGTGTTCAACCATTGTCCCCAAGCATTGCTTCCAGTACTGCATATGTTGGTACAGTAACTGCAATGCCTGAAAACACAACTACTGCTAGCAGTGACAAGGAGAGTGATCTACGAGAATTGCAGCTCATGACTGAGCCATATGGAGTTCCTTGTATGGTGGAGATATTTCACTTCTTGTGTTCTTTGTTGAATGTTGTTGAGCACATGGGAGTGAATCCTAGATCAAACACACTAACGTTTGATGAAGATGTGCCTCTTTTTTCCCTAAGTTTGATTAATTCAGCCATTGAGTTGGGAGGGCCTTCCTTTCGTCATCACCCCAGATTGCTGCGTTTAATTCAAGATGAAGTATTTCATATTCTTATGCAATTCGGTTTGTCAATGAGTCCTCTTGTGCTTTCAATGGTGTGTAGCATTGTTCTCAATTTGTATCACCATCTTCGAACAGAACTCAAATTACAGCTAGAAGCATGTTTTTCATGTGTAATTTTGAGGCTTGCACAAAGCAAATATGGGGCTTCGTATCCGCAACAGGAGGTTTTGATGGAGGCACTTGTTGATTTGTGCAGGCAAAAGACATTCATGGTGGAGATGTTTGTTAACTTTGATTGTGACATTTCTTGCAGTAATGTCTTTGAAGATATTGCAAATTTGTTGTCCAAAAGTGCTTTTCCAGTAAATAACCCATTATCTTCCATGCATATTCTTGCTTTGGATGGTCTTATTGCTGTAATGCAGGGAATGGCCGATAGGATAGGTAATGGATTTGTCAGTTCAGAACATTCTCCTGTGAATTTTGAAGAGTACATACCGTTCTGGCTGGAGCAGTGTGAAAATTTTGGTGACCCAAATGAATGGGTTCCTTTTGTCCGCCGAAGAAAGTACTTTAAGAGAAGATTGATGATTGGAGTTGATCACTTTAATCGTGATGCTAAGAAAGGTCTCAAGTTTCTCCAGGGAACGCATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCCTGCTTTTTAAGATTCACCGCTGGTTTGGATAAGAATGTCATTGGTGATTTCTTAGGAAACCACGATGAATTCTGTGTTCAGGTTCTTCGTGAATTTTCTAGGACATTTAATTTCCAAGATATGACCTTAGACACAGCTCTGCGTATATTTTTGGAGACTTTTAGGCTGCCTGGAGAATCACAGAAGATACATAGGGTACTTGAAGCTTTCTCTGAGAGATATTATGAGCAGTCACCACATATCCTAGTTAACAAGGATGCTGCTCTTGTGCTGTCATACTCAATTATAATGCTTAATACCGATCAGCACAATGTGCAGGTCAAAAAGAAGATGACAGAAGCAGATTTTATCAGGAATAATAGGCATATAAATGGCGGCGAAGATCTACCTCGAGAATTCCTGTCAGAGATTTACCAATCTATTTGCAAGAATGAAATCCGCACAACTCCTGAATCAGGCTTTGGATCTCCTGGAATGACCCCAAGTCGATGGATTTCTCTAATACACAAGTCAAAAGCAACCGCCCCATACATTGTATCTGATTCCAGAGCATACCTGGATTATGATATGTTTGTTATATTGTCAGGCCCAACAATCGCTGCTGTTTCTGTGGTATTTGATAATGCTGAAAATGAAGAGGTATACCAAACATGTATAGATGGATTCTTAGCTATTGCAAAGATATCGGCTTACTATCATCTTGAAAATGTTCTAGATGATCTGATTGTGTGTCTCTGTAAGTTCTTCACCATTTTGGATCCATTATCAGTTGAGGAATCTGTCCAAGCCTTTGGAGATGACACAAAAGCACGAATGGTAACTGAGACAGTTTTCACTATTGCAAGTAGGTATGGTGATTACATTCGTACTGGCTGGAGGAATATTCTTGATTGCATCTTAAGATTGCACAAGTTAGGCCTTCTTCCTACTTATTTGGCCAGTGATGCAGTTGACGAGTCAGAGCCTTCTACAAAAACTGGACATGGGAAACTTAAATCAAATTCTTTATCATTGCCTCGTCTTCAGTCTATTAGTACTCCAAAGAGATCCTCAGGGTTATTGAGCAGATTTAGTCAACTATTATCTCTTGCCACGGACGAGCCAAGAGCAATACCAACTGAAGAACAACTGGCCGCTCATCATCATGCCGTGCAAACAATTCAAAAGTGTCACATCGACAGCATATTCACTGAAAGTAAATTCTTGCAGGCTGAATCCCTATCGCAGCTAGTAAGATCACTCATCAATGCTGGAGCTCAATCTCAGAAGAGGAAGAAAATATCTCAGTTTGAAGATGCTTCGGTTTTCTGCCTGGAGTTACTGGTAGCAATCACTCTAAATAACAGGGATAGGATTGGGCTTATATGGAAGAGTGTTTATGAGCACATATCCAATATTGTTAAATCAACGGTGATGCCATGTGCACTGGTAGAAAAGGCTGTTTTAGGACTTCTAAGGATTTGCCATCGCTTACTTCCCTATAAAGAGAACATGGCTGATGACCTTTTGAAGTCTCTGCAACTTATCTTGAAGCTTGATGCACTGGTTGCAGATGCATACTATGAGCAGATAACATGGGAAGTCAGTCGCCTTGTTAAGGCAAATGCGTCTCATATCAGATCTCATTTAGGATGGCGGACAATTACGTCACTACTTTCTGTCACCGCTAGACACCTCGAAGCATCCGAGGTTGGATTTGATACACTGTCATTCATTATGTCGGATGGAACTCACTTGCTCCCTGCTAATTATATTCTCTGCATAGATGCCGCGAGGCAGTTTGCTGAGTCTCGCGTAGGACTGGTGGGTCGGTCCATAGGTTCACTAGACCTTATGGTAGGTTCTTTCAACTGTTTGCAAAAGTGGACTGGTGATGCAAAGCAAGCAGCGAAAGAAGAGGAAGTGGAAAAGATGTTGCAGGATATTGGGGAAATGTGGTTGAGGTTAGTACAAGGACTAAGGAAAGTATGCTTGGACCAAAGAGAGGAGGTTAGAAATCACGCGCTGCTATCCTTGCAGAAGTGCATGACAGAAGCTGTTGAAACTCGTCTCCCATGTGATTTGTGGTTACAGTGTTTCGATCAAGTGATTTTCACCTTGCTCGATGACCTGCTTGACATTGCTGAGGAACACTCTCCAAAGGACTACCAGAACATTGAAGAAACACTTATTCTTGCAATGAAGCTCTTATTTAAAGTTTTTCTCCAATTACTACAAGAACTATCACAACTTGAAACCTTTTCTAAACTATGGGTAGGTGTACTAAGTCATGCAGAAAATTACGTGAAGGCAAAAGTTAGAGGAAGGAGAATCGAGAAGCTTCAGTTCATTGTTCCGGAGCTTCTGAAGAACACGTTGGTTGTTATGAAATCAAGGGGCATACTAGTGGAGAACAGTGATTTATGGGAACTGACATGGTTACATATGAAGAATATAGTTCCCTCGTTGCAGTCCGAGGTGTTACAAGAGCAGTTGGATCAAAAGCAGATTGAAACAGTTGCAAAATTGGAACATGATTCAAACATTTCTGTTCCTTCAAATGAAACACTTGGTCAAGATGGTGCTGTTATTATTAGTTAA 4374 0.4081 MGQLKMQMPAGLNNGIEDQFEQCDAGYPNKTTIACMINAEIGSVLAVMRRNVRWGVHYMSDDDQSEHFLVQSLKTLRRQIFSWQDQWHSINPALYLQPFLDVIQSDETGAPITGVALSSVYKILTLDVIEQNTVNVIDTMDLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSKASVILSNQHICTIVNTCFRIVHQAGTKGELLQRIARYTMHELVRCIFSHLQEIDITESPKQETCELNNEHASASRQFENGSLNSAYGVQPLSPSIASSTAYVGTVTAMPENTTTASSDKESDLRELQLMTEPYGVPCMVEIFHFLCSLLNVVEHMGVNPRSNTLTFDEDVPLFSLSLINSAIELGGPSFRHHPRLLRLIQDEVFHILMQFGLSMSPLVLSMVCSIVLNLYHHLRTELKLQLEACFSCVILRLAQSKYGASYPQQEVLMEALVDLCRQKTFMVEMFVNFDCDISCSNVFEDIANLLSKSAFPVNNPLSSMHILALDGLIAVMQGMADRIGNGFVSSEHSPVNFEEYIPFWLEQCENFGDPNEWVPFVRRRKYFKRRLMIGVDHFNRDAKKGLKFLQGTHLLPDKLDPQSVACFLRFTAGLDKNVIGDFLGNHDEFCVQVLREFSRTFNFQDMTLDTALRIFLETFRLPGESQKIHRVLEAFSERYYEQSPHILVNKDAALVLSYSIIMLNTDQHNVQVKKKMTEADFIRNNRHINGGEDLPREFLSEIYQSICKNEIRTTPESGFGSPGMTPSRWISLIHKSKATAPYIVSDSRAYLDYDMFVILSGPTIAAVSVVFDNAENEEVYQTCIDGFLAIAKISAYYHLENVLDDLIVCLCKFFTILDPLSVEESVQAFGDDTKARMVTETVFTIASRYGDYIRTGWRNILDCILRLHKLGLLPTYLASDAVDESEPSTKTGHGKLKSNSLSLPRLQSISTPKRSSGLLSRFSQLLSLATDEPRAIPTEEQLAAHHHAVQTIQKCHIDSIFTESKFLQAESLSQLVRSLINAGAQSQKRKKISQFEDASVFCLELLVAITLNNRDRIGLIWKSVYEHISNIVKSTVMPCALVEKAVLGLLRICHRLLPYKENMADDLLKSLQLILKLDALVADAYYEQITWEVSRLVKANASHIRSHLGWRTITSLLSVTARHLEASEVGFDTLSFIMSDGTHLLPANYILCIDAARQFAESRVGLVGRSIGSLDLMVGSFNCLQKWTGDAKQAAKEEEVEKMLQDIGEMWLRLVQGLRKVCLDQREEVRNHALLSLQKCMTEAVETRLPCDLWLQCFDQVIFTLLDDLLDIAEEHSPKDYQNIEETLILAMKLLFKVFLQLLQELSQLETFSKLWVGVLSHAENYVKAKVRGRRIEKLQFIVPELLKNTLVVMKSRGILVENSDLWELTWLHMKNIVPSLQSEVLQEQLDQKQIETVAKLEHDSNISVPSNETLGQDGAVIIS* 1458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0077 1457 Gene3D - 554 636 - -
Tpr3g0077 1457 ProSiteProfiles SEC7 domain profile. 553 742 IPR000904 GO:0005085|GO:0032012
Tpr3g0077 1457 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12 1447 - -
Tpr3g0077 1457 SUPERFAMILY Sec7 domain 558 745 IPR035999 GO:0005085|GO:0032012
Tpr3g0077 1457 CDD Sec7 561 744 IPR000904 GO:0005085|GO:0032012
Tpr3g0077 1457 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 314 475 IPR032691 -
Tpr3g0077 1457 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 12 1447 - -
Tpr3g0077 1457 Pfam Sec7 domain 561 744 IPR000904 GO:0005085|GO:0032012
Tpr3g0077 1457 SMART sec7_5 557 744 IPR000904 GO:0005085|GO:0032012
Tpr3g0077 1457 Gene3D - 637 752 IPR023394 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0077 Tpr-Chr3 988219 995127 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0077 K18443 - gmx:100802024 2288.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3208 4 38056200 38065193 Tpr3g0077 3 988219 995127 PCT