Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5887 ATGGCGGGTAAAGTGGTTATTAATATTTCCAACAACATAAGTAGCAACGGAGACGTGGTTGTCAATGGCGATGACGAGAAGAAACCAATGAAATTAAGCAGCAGGCACCATGGCGTAGATCCAGCCAACGCACTTGACAATGCCCGCCACGTATTCGGTGAACATGGCGGTGTCAACATGTCCATTGAGGCCTCCGCCATGTTCACCGTCATGGAACCAGAGACTCTCTCCAAAATTATTGCCAAAGAGCTTGGTCCAGAAAATGATTATTTTGTCTACAGCCGTAATTTTAACCCAACTGTCCTCAATCTTGGCCATCAGATGGCCGCACTCGAAGGCACCGAGGCCGCCTATTGTACGGCCAGCGGCATGTCTGCCATTGCGTCGTCTCTGTTACAGCTCTTAAGTTACGGCGGACACATGGTGGCTTCTGGTAACTTGTATGGTGGAACTCACTCACTCCTCACACATTTCTTTCCAAGGAAATGCAACATAACCACAACTTTTGTTGATATTGCGGATTTAGAAGCGGTGGAGAATGTGATTGTGGAAGGGAAGACAAAAGTGCTTTATTTTGAGTCTATTGCGAATCCAAGCTTGAAGGTGGCGAATACACCGGAGCTGGCTAGAATTGCTCACAAAAAGGGAGTGACAGTGGTTGTTGACAACACATTTGCTCCCATGGTGCTTTCTCCTGCTCGTCTTGGTGCAGATGTTGTTGTTCATAGTATCTCCAAGTTTATAAGTGGTGGTGGTGACGTTATTGCAGGAGCAGTGTGTGGATCTACAAGATTTATAAATTCCATGATGGACGGTCAACAAGGGACCATAAAGCTTTTGGGTCCAACAATGAATGCAAATGTAGCCTTTGATCTAGCACAAAGAATCCCACACTTGGGTCTTCGGATGAAAGAACATAGCAACCGTGCATTGGAGTTTGCAATCAGGCTTAAGAAATTAGGATTAAGGGTGATCTACCCTGGCCTTGAAGACCACCCACAACATGAACTATTGAAATCAATTGGCAACAAAGATTATGGATATGGTGGAGTTATTTCTATTGACATGGGGACAGTGAAGAATGCTAACAAATTCATGAGCTATTTGCAAAACTATAGTCAATTTGGTTTCATGGCTGTTAGTTTAGGGTACTATGAGACAGTAATGTCTTGCACTGGTAGTAGCACAAGTCGTGAGATGAATGAGGAGGAACAAAAACTTGCTGGAATCACACCTGGACTAATAAGGATGTCTGTTGGATACATTGGAACATTGGAGCAAAAGTGGAGTAAGCTGGAAAAAGCACTTGTGAAATATAATGAAAAATAA 1329 0.4379 MAGKVVINISNNISSNGDVVVNGDDEKKPMKLSSRHHGVDPANALDNARHVFGEHGGVNMSIEASAMFTVMEPETLSKIIAKELGPENDYFVYSRNFNPTVLNLGHQMAALEGTEAAYCTASGMSAIASSLLQLLSYGGHMVASGNLYGGTHSLLTHFFPRKCNITTTFVDIADLEAVENVIVEGKTKVLYFESIANPSLKVANTPELARIAHKKGVTVVVDNTFAPMVLSPARLGADVVVHSISKFISGGGDVIAGAVCGSTRFINSMMDGQQGTIKLLGPTMNANVAFDLAQRIPHLGLRMKEHSNRALEFAIRLKKLGLRVIYPGLEDHPQHELLKSIGNKDYGYGGVISIDMGTVKNANKFMSYLQNYSQFGFMAVSLGYYETVMSCTGSSTSREMNEEEQKLAGITPGLIRMSVGYIGTLEQKWSKLEKALVKYNEK* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5887 442 Pfam Cys/Met metabolism PLP-dependent enzyme 55 420 IPR000277 GO:0019346|GO:0030170
Tpr2g5887 442 Gene3D Aspartate Aminotransferase, domain 1 300 442 IPR015422 GO:0003824
Tpr2g5887 442 PANTHER METHIONINE GAMMA-LYASE-LIKE 25 438 - -
Tpr2g5887 442 PIRSF CGS 26 440 IPR000277 GO:0019346|GO:0030170
Tpr2g5887 442 SUPERFAMILY PLP-dependent transferases 70 436 IPR015424 -
Tpr2g5887 442 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 25 438 IPR000277 GO:0019346|GO:0030170
Tpr2g5887 442 Gene3D - 42 296 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5887 Tpr-Chr2 70595005 70597652 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5887 K01761 - gmx:100777207 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1665 1 15834280 15840900 Tpr2g5887 2 70595005 70597652 PCT