Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1665 ATGGCCGACACTTTCCTCATCACCACCACCACCACCAAACGCAACCGTCCTGACGACGAAACCGAAACAAAAAAGAAACTCATGACACCCTCCCCACAAAACATCTTCACCGATCCAGCCGCCGCACTCGCCAGCACTCGTCATGAATTCGGCGAACACGGCGGCGTTAACATGTCAATTGAAGCCTCAGCAACTTTCACTGTCATGGAACCAGAAACTCTCCGGCGTATATTCACAGGAGAGTTAGGTCCAGACAGTGATTACTACGTTTACAGCCGTCACTTTAATCCAACGGTGTTAAATCTAAGCCGACTGATGGCTTCTCTGGAAGGAACAGAAGCCGCTTACTGTACAGCAAGCGGCATGTCCGCCATTTCCGCTTCAATTCTCCAACTAACAAAAAGCGGAGGACACGTGGTAGCTTCTAGAACACTCTACGGTGGAACTCACGCGCTTCTACAACACTTTCTACCACGCACATGCAACATAACAACAACTTTTGTTGAGATTTCTGATATTGAGTCGGTTGATGAAGCGATTATTGAAGGGAAAACGAATGTTTTGTATTTTGAATCGGTTTCGAATCCGACACTTACGGTGGCGAATATACCGGAGTTAAGTAGAATTGCGCATAAGAAAGGTGTTACGGTGGTTGTTGATAATACTTTTACTCCGATGGTGATTTCGCCGGTGAAGCTTGGTGCTGATGTGGTTGTTCATAGTATCTCGAAGTTTGTGAGTGGTGGGGCTGACATCATTGCAGGGGCTGTATGTGGGACTGCAAGCCTAGTAAATTCCATGATGGATCTCCAACAAGGTGCCATAATGCTATTAGGCCCAACAATGAACGCTAAAATAGCATTTGAACTATCAGAAAGAATCCCTCACTTAGGTCTAAGGATGAAAGAACATAGCAACCGTGCATTAACTTTTGCAACAAGACTAAAGAAATTAGGACTCAAGGTAATCTACCCTGGCCTAGAAGATCATCCACATCATGAATTATTGAAATCCATTCACAACAAAGATTATGGGTATGGTGGACTTTTATGTATTGACATGGAAACTGAGGACAGAGCTAACAAATTGATGAGTTACTTGCAAAACTATGGTCAATTTGGTTTCATGGCTGTTAGTTTGGGTTACTATGAGACACTCATGTCTTGTTCCGGAAGTAGCACTAGTAGCGAGTTGAGTTCCGAGGAAAAGGTCCTTGCAGGGATCTCGCCTGGTCTTGTGAGGATGTCAGTAGGATATATTGGGACATTGGAGCAGAAATGGAACCAACTTGAAAAGGCGGTTACTAAACTTCAGGAATATGGGTTCGCTAATAAAAATTGA 1341 0.4422 MADTFLITTTTTKRNRPDDETETKKKLMTPSPQNIFTDPAAALASTRHEFGEHGGVNMSIEASATFTVMEPETLRRIFTGELGPDSDYYVYSRHFNPTVLNLSRLMASLEGTEAAYCTASGMSAISASILQLTKSGGHVVASRTLYGGTHALLQHFLPRTCNITTTFVEISDIESVDEAIIEGKTNVLYFESVSNPTLTVANIPELSRIAHKKGVTVVVDNTFTPMVISPVKLGADVVVHSISKFVSGGADIIAGAVCGTASLVNSMMDLQQGAIMLLGPTMNAKIAFELSERIPHLGLRMKEHSNRALTFATRLKKLGLKVIYPGLEDHPHHELLKSIHNKDYGYGGLLCIDMETEDRANKLMSYLQNYGQFGFMAVSLGYYETLMSCSGSSTSSELSSEEKVLAGISPGLVRMSVGYIGTLEQKWNQLEKAVTKLQEYGFANKN* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1665 446 PIRSF CGS 25 438 IPR000277 GO:0019346|GO:0030170
Tpr1g1665 446 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 31 438 IPR000277 GO:0019346|GO:0030170
Tpr1g1665 446 MobiDBLite consensus disorder prediction 1 25 - -
Tpr1g1665 446 PANTHER METHIONINE GAMMA-LYASE-LIKE 31 438 - -
Tpr1g1665 446 SUPERFAMILY PLP-dependent transferases 51 432 IPR015424 -
Tpr1g1665 446 Pfam Cys/Met metabolism PLP-dependent enzyme 51 418 IPR000277 GO:0019346|GO:0030170
Tpr1g1665 446 Gene3D - 40 293 IPR015421 GO:0003824
Tpr1g1665 446 Gene3D Aspartate Aminotransferase, domain 1 298 443 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1665 Tpr-Chr1 15834280 15840900 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1665 K01761 - gmx:100808736 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1665 1 15834280 15840900 Tpr2g5887 2 70595005 70597652 PCT