Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4681 ATGCCTGGTTTTGTTGTTGGAAAGAAGAGATTTATAAAGTCAAATATGTGTTTCGCCGATTCAGTCAATCAAGATAAATCAACTCATACGCGAAGCAATCATAGTTTAACTAGTGAGTCTATGGATAAAGATGATAGCCCTATGGCTATTCTACCTGGGCTGCCCGATGATGTCGCAAAGTATTGCCTTGCACTTGTTCCTCGTTCTAACTTCCCAACTATGGGTGGTGTCTGTAAGAAATGGAGGTTGTTTATTCAAAGCAAAGAATTTGTAATGGTGCGAAAATTGGCAGGGTTGCTAGAGGAATGGCTCTATTGCTTAACAATGGACAGTGAAGGGAGGGAAAGCCATTGGGAGGTAATGGATTGCCTCGGTCGCAAATGTCTATCCCTTCCACAAATGCCTGGTCCATGTAAGGCTTCGTTCGGGGTTGTAGTTCTTAATGGAAAGCTTATTATCATAGCTGGTTATTCAGCTATTGAAGGAACCGCCGTTGCCTCAGCAGAGGTTTACCAATATGATTCGTACCTTAACAGTTGGAGTAGATTATCAGACATGAATGTGGCTCGTTATGACTTCGCTTGTGCCGAAGTGAACGGCTTGGTTTATATTGTTGGAGGTTATGGGGTGAATGGTGACAATCTCTCTAGCGTTGAGATGTATGATCCAGATACTAACAAGTGGACACTGATAGAGAGCCTTCGTCGCCCAAGGTGGGGTTGCTTTGCTTGTGGATTTGAAGATAAGCTCTATGTCATGGGTGGAAGGTCAAGCTTTACTATCGGAAACTCCAGGTTTGTCGATATATATAACCCCGAGAAGCACAGCTGGTGCGAGATTAAGAATGGCTGTGTTATGGTCACGGCTCATGCAGTATTGGAAAAGAAATTGTTCTGTATTGAGTGGAAAAACCAGCGGAAGCTGGCAATATTCAGTCCAGAGAACAACTCATGGACAATGGTACCTGTCCCATTGACAGGGAGCTCGAGTGTTGGTTTTCGATTTGGGATACTGGATGGAAAGTTATTGCTATTTCCCTTGGAAAAAGAACCTACTAGTCAAACATTGTTATATGATCCAAATGCAGCTTTGGGATCAGAGTGGCAAACTTCAGACATAAAGCCATCTGGTTTGTGCTTGTGCAGTGTGACAATGAAGGCATGA 1164 0.433 MPGFVVGKKRFIKSNMCFADSVNQDKSTHTRSNHSLTSESMDKDDSPMAILPGLPDDVAKYCLALVPRSNFPTMGGVCKKWRLFIQSKEFVMVRKLAGLLEEWLYCLTMDSEGRESHWEVMDCLGRKCLSLPQMPGPCKASFGVVVLNGKLIIIAGYSAIEGTAVASAEVYQYDSYLNSWSRLSDMNVARYDFACAEVNGLVYIVGGYGVNGDNLSSVEMYDPDTNKWTLIESLRRPRWGCFACGFEDKLYVMGGRSSFTIGNSRFVDIYNPEKHSWCEIKNGCVMVTAHAVLEKKLFCIEWKNQRKLAIFSPENNSWTMVPVPLTGSSSVGFRFGILDGKLLLFPLEKEPTSQTLLYDPNAALGSEWQTSDIKPSGLCLCSVTMKA* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4681 387 Gene3D - 89 385 IPR015915 GO:0005515
Tpr2g4681 387 PANTHER KELCH REPEAT F-BOX PROTEIN 1 387 - -
Tpr2g4681 387 Pfam Kelch motif 238 281 IPR011498 GO:0005515
Tpr2g4681 387 SMART kelc_smart 249 297 IPR006652 GO:0005515
Tpr2g4681 387 SMART kelc_smart 201 248 IPR006652 GO:0005515
Tpr2g4681 387 SMART kelc_smart 150 200 IPR006652 GO:0005515
Tpr2g4681 387 SUPERFAMILY Kelch motif 101 360 IPR015915 GO:0005515
Tpr2g4681 387 Pfam Kelch motif 140 187 IPR006652 GO:0005515
Tpr2g4681 387 Pfam Kelch motif 189 234 IPR006652 GO:0005515
Tpr2g4681 387 PANTHER OS02G0202900 PROTEIN 1 387 IPR045887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4681 Tpr-Chr2 52122293 52126070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4681 54 232 Miscellaneous Gene Families AT4G33900 28.497 1.16e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4681 - - gmx:100802912 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4681 2 52122293 52126070 Tpr2g4681 2 52122293 52126070 ECH
Tpr2g4681 2 52122293 52126070 Tpr3g1313 3 11625361 11628230 PCT