Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4506 ATGAGTAACGTCACAGAAAAATTGGGCATCAAGATTGAGAGAAACCCTTCTGAGGAAAAACTCACTCAACTTGGTGTTAGGCAATGGTCCAAATGGAATTGTTCTCCAAGCAAATTCCCATGGACGTATGATTCCAAAGAAACATGTTATCTTCTAGAAGGAAAAGTTAAGGTAACACCAAGTGGAGCAAATGAGTCAGTTGAATTTGGTGCTGGTGACTTGGTTGTGTTTCCTAAAGGGATGAGTTGTACTTGGGATGTTTCTGTTGCTGTGAACAAGCATTATCTCTTTGAATAA 297 0.3939 MSNVTEKLGIKIERNPSEEKLTQLGVRQWSKWNCSPSKFPWTYDSKETCYLLEGKVKVTPSGANESVEFGAGDLVVFPKGMSCTWDVSVAVNKHYLFE* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4506 98 Gene3D Jelly Rolls 1 97 IPR014710 -
Tpr2g4506 98 SUPERFAMILY RmlC-like cupins 21 96 IPR011051 -
Tpr2g4506 98 PANTHER OS04G0445200 PROTEIN 3 98 - -
Tpr2g4506 98 CDD cupin_TM1112-like 29 97 - -
Tpr2g4506 98 PANTHER OS04G0445200 PROTEIN 3 98 - -
Tpr2g4506 98 Pfam EutQ-like cupin domain 22 95 IPR008579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4506 Tpr-Chr2 49641992 49644199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4506 K06995 - gmx:100527331 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4506 2 49641992 49644199 Tpr1g1723 1 16512881 16514121 PCT