Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1723 ATGGCATCATCATGTGTAGGAACTTTATCATCACTCAACTCCCCTCTACTTCTCTCACAAACCAAACATTTATCTGCTAGTGCTACTCCCAGGGTAAGTGTAACTTTGCCTTCAACAAAGAGAAGATCAGTTGTAAGAGCAGCTGTTACAGAGAAACTTGGCATCAAGATTGAGAGGAACCCTCCTGAGTCCAAGCTCACTCAACTTGGTGTTAGGCAGTGGCCCAAATGGGGATGCCCTCCAAGCAATTTTCCATGGACATATGAAGCCAAAGAGACATGCTATCTTTTGGAAGGAAAAGTGAAGGTGACTCCTAGTGGGGCTAATGAAGCAGTTGAAATTGCTGCTGGTGATTTGGTTGTGTTTCCTAAAGGGATGAGTTGCACTTGGGATGTTTCTGTTGGTGTGGATAAGCACTATAAATTTGAATAA 432 0.4329 MASSCVGTLSSLNSPLLLSQTKHLSASATPRVSVTLPSTKRRSVVRAAVTEKLGIKIERNPPESKLTQLGVRQWPKWGCPPSNFPWTYEAKETCYLLEGKVKVTPSGANEAVEIAAGDLVVFPKGMSCTWDVSVGVDKHYKFE* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1723 143 PANTHER OS04G0445200 PROTEIN 37 143 - -
Tpr1g1723 143 Gene3D Jelly Rolls 43 142 IPR014710 -
Tpr1g1723 143 CDD cupin_TM1112-like 74 142 - -
Tpr1g1723 143 Pfam EutQ-like cupin domain 67 140 IPR008579 -
Tpr1g1723 143 SUPERFAMILY RmlC-like cupins 62 140 IPR011051 -
Tpr1g1723 143 PANTHER OS04G0445200 PROTEIN 37 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1723 Tpr-Chr1 16512881 16514121 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1723 K06995 - gmx:100527470 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1723 1 16512881 16514121 Tpr1g1723 1 16512881 16514121 ECH
Tpr2g4506 2 49641992 49644199 Tpr1g1723 1 16512881 16514121 PCT