Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4492 ATGTCTAAACCTCTGAGTGATCATCCTCTTCCGCAAGCGGAAACAACATGTGGATCACTTCTTCAAGAACTTCAGATAATATGGCATGAAGTTGGGGAGTCTGAGTCTGATAAAGATAGGATGTTGTTTGAGATCGAACAAGAGTTTCTAGAAGTATACAGAAGAAAGATAGATAAAGCTAATTGCTCTAGAGCTCAAATAAGGCAGGAAATTGCTGATTCCGAGGCAGAACTTACAGCTATCTGTTCAGCAATGGGAGAGCGACCAGTACATAGTAGACAGTCTGGTCAAAAAGCTAGAAGCTTGAAGGAAGAGCTAGAAATGATTGTCCCGGAGCTGGAGGAAATGCAAAAACGAAAGCATGATCGTAGAAATCAATTCATAGAAGTTCAAGAGCAGATTCAAAGTATCTCAAATGAGATCCATTGTCCAAGAGAAATTATCCCGTTCATTGTAGATGATACTGATTTATCATTGAGGAAACTTGAAGAATTGCACAGGCAACTTCACACACTTCAAAAGGAGAAGAGTGATCGTCTCAAGAAGGTCCAAGATAACCTGCACAGTTTAAGTTCTCTCTGTTCAGTACTTGGATTGGACTTTAAGCAGACAGTCAGTGAAGTCCATCCTAGTTTAGGAAACTCAGAAGGATCTAGGAGTGTAAATAATGATACCATCAGCCAATTGGCTTTAGCTATACAAGAATTACGAGGAGTGAAATTGCAGAGAATGCAAAAGCTTCAAGATCTAGCAACGTCAATGTTGGAGCTCTGGAATTTGATGGATACACCTATTGAAGAGCAACAGGTATTTCAGAATGTTACTTGTAACATTGCAGCTTCAGAAGATGAAGTAACTGAACCAAACGCCTTGTCTGAGGACTTCATTAATAATGTGGAGGAAGAAGTATCAAGATTAGAGGACTTAAAATCAAGCAAAATGAAAGAACTTGTTTTCAAGAAAAGATCAGAGCTAGAGGAGATTTGTAGAAAGACTCATTTGATTCCAGAATTTGATGGTGCGGTCGAATATACTATTGAAGCTATAGAGGCTGGATCTGTAGATCCTGCTTCTGTACTTGAACAAATTGAACTTCAGGTTGCCCAAGTCAAAGAGCAAGCTTTTAGTAGAATAGAAATACTTGAAAAGGTTGATAAATGGTTGTCGGCGTGTGATGAAGAATCTTGGCTTGAGGAGTACAGCAGGGATGAAAATCGATACAATGCTGGTAGAGGTACTCATCTTAATCTCAAACGAGCTGAGAAAGCCCGTGTCTTGGTGAATAAAATTCCAGCAATGACAGAAAACTTGATTTCAAAAACAGTAGCATGGGAAAAGGATAATGGCACTGAGTTCATATATGATAGTGTCCGCCTGCTTTCTATGCTTGAAGACTACAACTTATTACGGCAAGAGAAGGAGCAAGAACGCCGTAGACAGCGGGACATGAAGAAACTTCAGGGACAACTGGTAGCAGAGCAGGAAGTATTGTATGGGTCAAAAAGCCCTTCAAAGCCCCAGAGTGCAAGAAAGGCACCTAGGACGCCAAGTGGAAGCGCAGGTAGTAGAAGAGGTGCCTTTGGAGGATCAATGCTAAAACCTGATTCAAAGCTTACTCGCTCAAGCTCCACAAGGAAGACTGACAGAGTGCACCAAATTGAGGACGATGGCATTTCATGTTTATCATCAGCTGGAAGAGGACTTGATAATATTGCTGATATTCCTATGAGGAAATACTCATTGGGTGCTGGAGTTGTTCGGGATATCAAATCTCCTTTGACACGACAACCTTTTACGATCATCTCTTCGACAATATCATCACAAGAGAATGTGAAAAATGTGACAGCTGAATCGAATTTGCAGAAGCAAAAGTTGCAGAAAACATTAGCAATTAACAATTTTCCATTCACCACCACCACTACTACTAATACTACTACTACTACTACTACTACCTCAAAAGCAGAGAAAGTTGTAGATGAAGAGAATAGAACTCCAAAGGCAATGCCTATTCCTGCCTCCACTACTACACCAAGGACAGTGTCAATACCTATGAATATGGCCATTACTCCAGCTCCTTTTGGAAGTAATTTTGTTCAAGAAATTGAATATTCCTTTGAGGAAAGAAGGCTTGGTTTTGTATTAGTATGA 2148 0.4018 MSKPLSDHPLPQAETTCGSLLQELQIIWHEVGESESDKDRMLFEIEQEFLEVYRRKIDKANCSRAQIRQEIADSEAELTAICSAMGERPVHSRQSGQKARSLKEELEMIVPELEEMQKRKHDRRNQFIEVQEQIQSISNEIHCPREIIPFIVDDTDLSLRKLEELHRQLHTLQKEKSDRLKKVQDNLHSLSSLCSVLGLDFKQTVSEVHPSLGNSEGSRSVNNDTISQLALAIQELRGVKLQRMQKLQDLATSMLELWNLMDTPIEEQQVFQNVTCNIAASEDEVTEPNALSEDFINNVEEEVSRLEDLKSSKMKELVFKKRSELEEICRKTHLIPEFDGAVEYTIEAIEAGSVDPASVLEQIELQVAQVKEQAFSRIEILEKVDKWLSACDEESWLEEYSRDENRYNAGRGTHLNLKRAEKARVLVNKIPAMTENLISKTVAWEKDNGTEFIYDSVRLLSMLEDYNLLRQEKEQERRRQRDMKKLQGQLVAEQEVLYGSKSPSKPQSARKAPRTPSGSAGSRRGAFGGSMLKPDSKLTRSSSTRKTDRVHQIEDDGISCLSSAGRGLDNIADIPMRKYSLGAGVVRDIKSPLTRQPFTIISSTISSQENVKNVTAESNLQKQKLQKTLAINNFPFTTTTTTNTTTTTTTTSKAEKVVDEENRTPKAMPIPASTTTPRTVSIPMNMAITPAPFGSNFVQEIEYSFEERRLGFVLV* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4492 715 Coils Coil 459 489 - -
Tpr2g4492 715 Coils Coil 162 182 - -
Tpr2g4492 715 MobiDBLite consensus disorder prediction 500 515 - -
Tpr2g4492 715 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 8 632 - -
Tpr2g4492 715 Coils Coil 50 77 - -
Tpr2g4492 715 Pfam Microtubule associated protein (MAP65/ASE1 family) 19 517 - -
Tpr2g4492 715 Gene3D - 366 500 - -
Tpr2g4492 715 MobiDBLite consensus disorder prediction 494 551 - -
Tpr2g4492 715 Coils Coil 296 316 - -
Tpr2g4492 715 Coils Coil 113 133 - -
Tpr2g4492 715 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 8 632 IPR007145 GO:0000226|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4492 Tpr-Chr2 49416190 49422133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4492 12 518 EF-hand Containing Proteins AT5G62250 56.923 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4492 K16732 - gmx:100777734 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4492 2 49416190 49422133 Tpr2g4492 2 49416190 49422133 ECH
Tpr2g4492 2 49416190 49422133 Tpr1g1730 1 16567180 16572581 PCT