Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1730 ATGTCTACTCCTCAAAAGGATCCACTTTCGCAAGCTGAAACAACGTGCGGATCACTTCTCTATGAACTTCAGATAATATGGGACGAAGTTGGTGAGGCTGAGCCTGACAGAGACAGAATGCTGTTTGAGCTTGAACAAGAGTGTCTTGAAGTGTACAGAAGGAAGGTAGATCAGGCAAATCGGTCTAGAGCTACACTAAGGCAGGCGATCGCTGATTGTGAGGCAGAACTTGCAGCCATCTGTTCTGCAATGGGAGAGCGACCAGTACACATTAGACAGTCTGATCAAAATGCTGGAAGCCTAAAGGAAGAGCATGCACGAATTCTTCCATATTTGGAGGAGATGAAAAAGCAGAAGTTTGAGCGCAGAAATCAATTTATGGAAGTTCAAGAGCAGATTCAAAACATCTCAATTGAGATTTATGGTCCCAAAGAGTATGTTCCTACCATTGTAGATGAAACTGATTTATCCCTGAGAAAACTTGAAGAATTACACAGACAACTAAATGCACTTCAAAGTGAAAAGAGTGATCGCCTAAAGAAGGTTCAGGAGCACCTGTACACATTAAATTCTCTTTGTTCAGTGCTCGGGTTTGACTTTATGCAGACAGTCCTGGGAATTCATCCCAGTTTGGGAGACATAGAAGGACCTACGAGTGTTAGCAATGATACAATTCAGCAACTCGCTGTTGCTACACAACAACTACGAGAAATTAAATTACAGAGAATGCAGAAGCTCCAAGATCTTGCAACAACAATGCTGGAGCTCTGGAACTTGATGGATACACCTATTGAAGAGCAACAAATGTTTCAGAATGTTACATGTAATATAGCTGCATCAGAAGATGAAATAACTGAACCAAACACCTTGTCCGCCGACTTTATCAATTGTGTGGAGGTGGAAGTATCTAGGTTAGAAGAATTAAAATCCAGCAAAATGAAGGAGCTTGTACTAAAGAAGAGAACAGAGCTGGAGGAGATTTGTCGAAAAACTCATTTGGTTCCAGAAACAGATGGTGCAATCGAATATGCTGTTGAAGCTATAGAATCTGGAGCTGTGGACCCTGCTTGTGTGCTCGAACAGTTTGAGCGTCAGGTTGCCCAAGTTAAAGAGGAAGCTTTGGGTCGAAAAGACATTCTTGAAAAGGTTGAAAAATGGCTGGCAGCATGTGATGAAGAGTCTTGGCTTGAGGAATACAACAGGGATGATAATCGATATAATGCTGGAAGAGGCGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCTCGTGGGTTGGTTAACAAAATTCCAGCAATGGTAGATGTGTTGACTTCAAAAACTATAGCATGGGAAAAGGAAAGAGGCGTCGAGTTCACATATGATGGTATTCGTCTACTCTCAATGATTGAAGAATACAATATATTACGGGAAGAGAAAGAACAAGAACGCCGCAGGCAGCGGGACCTGAAGAAGCTTCAGGGACAAATGATAGCGGAACAGGAGGCACTATATGGATCAAAACCAAGCCCTTCCAAGCCCCAAAGTGGAAAGAAGGGATCTAGGATGTCAACCGGAGGTGCAGCTAGTAGAAGAGTCTCTCTTGGAGGAGCAATGCTTCAGACTCCAAAACCTGATTCAAAAGCTACTAATTCACGTGCCATGAGAAAGACTGACAAAGTGCATCAATTTGAGCAACAAAGTTACTTGGATGATGGTGCTTCCTGTATATCATCAGGTAGTAGAAGAGTCTCTCTTGGTGGAGCAATGCTTCAGACTCCAAAACCTGATTCAAAAGCTACTAATTCACGTGCCACGAGAAAGACTGACAAAGTGCTTCAATTTGAGCAACAAAGTTACTTGGATGATGGTGCTTCCTGTTTATCACCAGCTCGAAGAGGACTGGATATTGCTGCCATTCCTGTACAAAAACATTCACTTGGTGCTGCTAGTGCTCAAGGCATGGAATCCCCTCTGACAAGACAACCTTTTGCTTCCATCTCATCTAATGTATCGTCAAAAGCAAATGTGGCAAATGCTGCAAATGAACCTGGCACACAGAAAACACTGCCCTTCACTAGTCCCTGCAAGGCAATGACTGCGACTGATTTAGAGAATATAACTCCAAAGGCCATGCCTATTCCTATCCCTGCAACACCTTCAACCGTATCAGTTCCTATGAGTATGGCTTTGACTCCTGTTCCTTCATCAGTTTTGATGAATAAGGCCATGGCTCCAGTTCCCTCGTCAACTCCTTTTGGATGTGACATGACTCCAGTTCAAGAGATTGAATATTCCTTCGAGGAAAGAAGACTGGCTCATTATATGTTAGCATGA 2313 0.4302 MSTPQKDPLSQAETTCGSLLYELQIIWDEVGEAEPDRDRMLFELEQECLEVYRRKVDQANRSRATLRQAIADCEAELAAICSAMGERPVHIRQSDQNAGSLKEEHARILPYLEEMKKQKFERRNQFMEVQEQIQNISIEIYGPKEYVPTIVDETDLSLRKLEELHRQLNALQSEKSDRLKKVQEHLYTLNSLCSVLGFDFMQTVLGIHPSLGDIEGPTSVSNDTIQQLAVATQQLREIKLQRMQKLQDLATTMLELWNLMDTPIEEQQMFQNVTCNIAASEDEITEPNTLSADFINCVEVEVSRLEELKSSKMKELVLKKRTELEEICRKTHLVPETDGAIEYAVEAIESGAVDPACVLEQFERQVAQVKEEALGRKDILEKVEKWLAACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARGLVNKIPAMVDVLTSKTIAWEKERGVEFTYDGIRLLSMIEEYNILREEKEQERRRQRDLKKLQGQMIAEQEALYGSKPSPSKPQSGKKGSRMSTGGAASRRVSLGGAMLQTPKPDSKATNSRAMRKTDKVHQFEQQSYLDDGASCISSGSRRVSLGGAMLQTPKPDSKATNSRATRKTDKVLQFEQQSYLDDGASCLSPARRGLDIAAIPVQKHSLGAASAQGMESPLTRQPFASISSNVSSKANVANAANEPGTQKTLPFTSPCKAMTATDLENITPKAMPIPIPATPSTVSVPMSMALTPVPSSVLMNKAMAPVPSSTPFGCDMTPVQEIEYSFEERRLAHYMLA* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1730 770 MobiDBLite consensus disorder prediction 542 558 - -
Tpr1g1730 770 Gene3D - 365 499 - -
Tpr1g1730 770 MobiDBLite consensus disorder prediction 500 515 - -
Tpr1g1730 770 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 7 685 IPR007145 GO:0000226|GO:0008017
Tpr1g1730 770 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 507 - -
Tpr1g1730 770 Coils Coil 154 181 - -
Tpr1g1730 770 Coils Coil 458 488 - -
Tpr1g1730 770 MobiDBLite consensus disorder prediction 492 558 - -
Tpr1g1730 770 Coils Coil 49 76 - -
Tpr1g1730 770 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 7 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1730 Tpr-Chr1 16567180 16572581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1730 10 543 EF-hand Containing Proteins AT5G62250 56.618 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1730 K16732 - gmx:100777734 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4492 2 49416190 49422133 Tpr1g1730 1 16567180 16572581 PCT