Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4482 ATGGCCCTCGAAACTTTACTCTTAAGAGTAAAAACAGCTTTTTCAAACAGTTTCGACACAGTTCACAAAACGACACCGTCTTCAAAAACAAACCCAAAACGCATCGCCGTTTTAGCCTTCGAAGTTGCCGGAGTTATGTCGAAGCTTCTTCATCTCTGGCAATCACTTTCCGACGCAAATATTGTTCGTCTTCAAAACGACGTCGTTTCACTCGAAGGTGTTTTGAAACTAATCTCAAACGACAAGTCGTTTTTAATCAAACTCGCTGTTGCTGAGTTCGCTGACTCACTCAGACTCGCTTCTGACTCAGTCTCTCGACTCAGTCTCAACTGCAATAACCCAACACTCCGATCTTTCCACCGAGTTTTCACTGAGTTCGCTGACTCGGGATTTGACTCAGTTGGTTGGACTCTCACCACCCCAAAAGAAATTGAATCCAAACATAGAAGAATGGAACGTTACGTGACTCTCACGTTAACTCTTCATAGAGAAATTGATGAGCTTTCACTTTTAGAAAGCACGTTGAGAAAAGCACTTCTCAACACCAACAACAAAAGCAGAATCAGTGATCTTGAACAAAAGATTTTCTGGCAGAAACAAGAGGTAAAGAATCTCAAAGAAAAATCATTATGGAACAAAGGTTTTGATAATGTTGTTCTGTTATTAGCAAGATTTGTTTTCACTTTGTTAGCAAGAATTAAGGTTGTTTTTGGAAATGGTAATGGAAATGGAAATCATTTACCTTATTTATCACGAAGTTTATCAACTTCTGCTGCTGTTTATCCTTCAGATCATCAAAAAGATCAAAACTTTGTATCTGGGCCGTTGAAAAGTTTCAAACTTGATGATTATTCTTCTGATCATAAAAAAGTTGAAAACTTTTCATCTGGGCCGTTGAAAAGTTTCAAACTTGATGAGAAAAAAGTTGATTTAAGAAATGGGTTTTTTGAGTCAAATTGTAAAGTTTTGAAACCACCACAAGGTAGTTTAGGTGATTCAGCTTTATCATTACATTATGCTAATTTGATTATTGTTATGGAAAAAATGATTAAATCACCTCAATTAGTTGGTGTTGATGCTAGAGATGATTTATATGCTATGTTACCAAATAGTATAAGATCATCATTGAGATTAAGGTTAAAAGGGTCAATTGGATTTAGTGCTTGTGATCCTTTATTGGCTAATGAATGGAAAAATGCTTTGGGTAGAATACTTTGTTGGTTGTTACCATTGGCACAAAATATGATTAGGTGGCAAAGTGAAAGAAGTGTTGAAGAAAAGAGATTGGTTCTTAAGAAATCTAATGTGTTGCTTTTGCAAACTTTGGTTTTTGCTAATAAGGTGAAGACTGAAGCTGCTATAACTGAGTTGCTTGTTGGTTTGAATTATATTTGGAAGTTTGAGAGGGAAATGACTGCTAAGGCTTTGTTTGATTGTAACAATGATTTTAATGGGTTTTTAAGTTTGTATAAATCTAGTTAA 1482 0.3556 MALETLLLRVKTAFSNSFDTVHKTTPSSKTNPKRIAVLAFEVAGVMSKLLHLWQSLSDANIVRLQNDVVSLEGVLKLISNDKSFLIKLAVAEFADSLRLASDSVSRLSLNCNNPTLRSFHRVFTEFADSGFDSVGWTLTTPKEIESKHRRMERYVTLTLTLHREIDELSLLESTLRKALLNTNNKSRISDLEQKIFWQKQEVKNLKEKSLWNKGFDNVVLLLARFVFTLLARIKVVFGNGNGNGNHLPYLSRSLSTSAAVYPSDHQKDQNFVSGPLKSFKLDDYSSDHKKVENFSSGPLKSFKLDEKKVDLRNGFFESNCKVLKPPQGSLGDSALSLHYANLIIVMEKMIKSPQLVGVDARDDLYAMLPNSIRSSLRLRLKGSIGFSACDPLLANEWKNALGRILCWLLPLAQNMIRWQSERSVEEKRLVLKKSNVLLLQTLVFANKVKTEAAITELLVGLNYIWKFEREMTAKALFDCNNDFNGFLSLYKSS* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4482 493 Pfam Protein of unknown function (DUF668) 330 417 IPR007700 GO:0045927
Tpr2g4482 493 PANTHER BNAC09G50660D PROTEIN 284 492 - -
Tpr2g4482 493 PANTHER BNAC09G50660D PROTEIN 1 287 - -
Tpr2g4482 493 Coils Coil 188 208 - -
Tpr2g4482 493 Pfam Domain of unknown function (DUF3475) 37 92 IPR021864 GO:0045927
Tpr2g4482 493 PANTHER DUF3475 DOMAIN PROTEIN 1 287 - -
Tpr2g4482 493 PANTHER DUF3475 DOMAIN PROTEIN 284 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4482 Tpr-Chr2 49306363 49307844 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4482 - - mtr:MTR_6g461910 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4482 2 49306363 49307844 Tpr2g4482 2 49306363 49307844 ECH
Tpr2g4482 2 49306363 49307844 Tpr1g1732 1 16613470 16615491 PCT