Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1732 ATGGCTCTTGAAACTCTCCTCTTCAAGGTCAAAACCGCCATTTCAAATAGCTTCGACTCTGTTCCACCTAAGCTTCTCAAAAAGAAACCTTCTTTCAAATCCAAACGAAACGTCGACGTTTTAGCTTTCGAGATCGCTGGTGTTATGTCGAAGCTTCTTCATCTTTTTCAGTCTCTTTCTGATGCAACCATCGTTCGAATCCGAAACGACGCCGTTACTCTTGAAGGTGTTCGGAAAATCATATCAAACGATGAGTCGTTTCTTCTTGGACTCGCTTGTGCTGAGTTTGCTGAGACACTCCGAATCGTTGCTAACTCGGTTACCCGACTAAGTCACCGATGCGAGGATCCTAATCTTAGGAATTTCCATCGGGCTTTTCTTGAGTTTGCTGATTCGGGCTGTGACCCAAATGGGTGGGCTTTTTCCAGCCCAAAGGAAATTGAAACTAAGTTTAGGAAAATGGAACGTTACGTGATGCTTACGGCAACTTTACACCGTGAAATGGAAGAGCTTTCTGTTTTGGAAAATGGGTTTAGAAAAGCTTTGAATTTGAATCATCATCATCGAAATAATCATCATCGTAATAATAGTTGTGAAGGAAATGAAGGTTCTTTGGGTGTTGGAAAAGAGCAGAAAATTTATGAACTTCAGCAGAAGATTTGTTGGCAGAAACAAGAGGTTAAGGATCTGAAAGATAGATGTTTGTGGAGTAGAAGTTTTGATGGTGTTGTTTTATTACTTGTGAGATTTTGTTTCACTGTTTTAGCAAGGATTAAGGTTGTTTTTGGTATTGGTCATTCTATGCCTTGTTTGTCATCACCTAATTTGTCAGCTTCTGCAACTGTTTATCCAAATTCTTGTCATGAATTTGTTTCTGGGTCATTGGAAAGCTCAGAGCTTGGAGAAAACAAAGAAGGTTTGGGAATTGGGTTTTTCGAGTCTAACTCAAAGCTTTTGAAACCACCTCCTAGTACCTTAGGTGCTGCTGCTTTGGCTTTACATTATTCCAACTTGATTATAGTGTTGGAGAAGATGATAAAGACACCTCATTTGATTGGTTTAGATGCTAGGGATGATTTGTATGGTATGTTACCTAGTAGCATAAGGTCAGGTTTAAGGGCTAGGTTGAAAGGAATTGGGTTTTGTGCAAGTGATCCTGTTCTTGCTGGTGAATGGAAAGATGCTTTGGGGAGGATATTAGGGTGGTTGTCACCTTTGGCACATAACATGATTAAGTGGCAAAGTGAAAGGAGTTTTGAGCAGCAAAATTTGGTGCCTAAGACTAATGTTTTGCTTTTGCAGACTTTGTTTTTTGCAAACAAAGAGAAGACTGAAGCTGCTATAACTGAGTTGCTTGTTGGGTTAAATTATATTTGGAGGTTTGAGAGAGAAATGACTGCTAAGGCTTTGTTTGAATGTGCCAATTTCAATGGTTTTATTAAATCTACAAAAACATAG 1458 0.393 MALETLLFKVKTAISNSFDSVPPKLLKKKPSFKSKRNVDVLAFEIAGVMSKLLHLFQSLSDATIVRIRNDAVTLEGVRKIISNDESFLLGLACAEFAETLRIVANSVTRLSHRCEDPNLRNFHRAFLEFADSGCDPNGWAFSSPKEIETKFRKMERYVMLTATLHREMEELSVLENGFRKALNLNHHHRNNHHRNNSCEGNEGSLGVGKEQKIYELQQKICWQKQEVKDLKDRCLWSRSFDGVVLLLVRFCFTVLARIKVVFGIGHSMPCLSSPNLSASATVYPNSCHEFVSGSLESSELGENKEGLGIGFFESNSKLLKPPPSTLGAAALALHYSNLIIVLEKMIKTPHLIGLDARDDLYGMLPSSIRSGLRARLKGIGFCASDPVLAGEWKDALGRILGWLSPLAHNMIKWQSERSFEQQNLVPKTNVLLLQTLFFANKEKTEAAITELLVGLNYIWRFEREMTAKALFECANFNGFIKSTKT* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1732 485 Pfam Protein of unknown function (DUF668) 325 412 IPR007700 GO:0045927
Tpr1g1732 485 Pfam Domain of unknown function (DUF3475) 40 95 IPR021864 GO:0045927
Tpr1g1732 485 PANTHER BNAC09G50660D PROTEIN 1 477 - -
Tpr1g1732 485 PANTHER SIMILARITY TO UNKNOWN PROTEIN 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1732 Tpr-Chr1 16613470 16615491 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1732 - - mtr:MTR_0318s0020 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4482 2 49306363 49307844 Tpr1g1732 1 16613470 16615491 PCT