Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4420 ATGCAAATTTCTTCTCCCATTGCACCAATAAGTAGCTTTGGCTTTTCTTTCATCTTTTCTCAAACCTCTATCTCTTTTCCTCTACATATTATTTTTTATCATTTTTATAATTATTATTATTATAGCATTGTTAATACAATGGCTATAGAATGCATTACAAGTAAAAATCACATGAATCAACCATCAAAACAAAACCATGATAAAAATGAAGATGAAGAATCATCATTAGTTTTTGATGCATCATTTCTAAAACACCAACTTAACATTCCAAAACAATTCATTTGGCCAGATGAAGAAAAACCATGCATGAATGTGAAAGAACTTGATGTTCCACTTATTGACTTGAAAAATTTCTTATCTGGTGACCCTTTTGCTGCAATGGAAGCTTCTAAAATCATTGGTGAAGCATGTGAAAAACATGGTTTTTTTCTTGTTGTTAATCATGGTATTGATGCAAAGTTAATAGAACATGCTCATAGTTACATGAATGATTTTTTTGAGGTTCCTCTGTCTCAAAAACAGAGAGCTCAGAGAAAAACAGGGGAACATTGTGGTTATGCTAGTAGTTTCACTGGTAGATTCTCTTCAAAACTTCCATGGAAAGAGACACTTTCTTTTCAATTTTCAGATGAGAAAAACTCACCTAAAATTGTTAAAGACTACTTATGCAACACTTTAGGAGAAGATTTTGAACAATTTGGGGATGTTTATCAAAAGTATTGTGAAGAAATGAGCACACTTTCTTTAGGGATAATGGAGCTACTTGGAATGAGTCTTGGAGTTGGAAAAGATTGTTTTAGAGAGTTTTTTGAAGAGAATAAATCAATAATGAGGCTTAATTATTACCCTCCATGTCAAAAACCTGATCAAGCTTTAGGAACTGGACCTCATTGTGATCCAACATCTTTAACTATTCTACATCAAGACCAAGTTGGTGGCTTACAAGTTTTTGTTGATAATGAGTGGCATTCCATTAGGCCAAATTTCAATGCTTTTGTTGTCAATATTGGTGACACTTTCATGGCACTTTCAAATGGGAGATACAAGAGTTGTTTACATAGGGCAGTGGTGAACAACAAAACAACAAGAAAATCTCTTGCATTCTTTTTATGTCCAAAAGGTGATAAGGTGGTTAGCCCACCAAGTGAATTGGTGAATGATTTGACACCAAGGATCTATCCAGATTTTACATGGTCTATGCTTCATGAATTTACTCAAAAACATTATAGAGCTGATATGAGAACACTTGAAGCATTCACAAAATGGATTCAACAAAAAAGTGGCTGA 1287 0.3333 MQISSPIAPISSFGFSFIFSQTSISFPLHIIFYHFYNYYYYSIVNTMAIECITSKNHMNQPSKQNHDKNEDEESSLVFDASFLKHQLNIPKQFIWPDEEKPCMNVKELDVPLIDLKNFLSGDPFAAMEASKIIGEACEKHGFFLVVNHGIDAKLIEHAHSYMNDFFEVPLSQKQRAQRKTGEHCGYASSFTGRFSSKLPWKETLSFQFSDEKNSPKIVKDYLCNTLGEDFEQFGDVYQKYCEEMSTLSLGIMELLGMSLGVGKDCFREFFEENKSIMRLNYYPPCQKPDQALGTGPHCDPTSLTILHQDQVGGLQVFVDNEWHSIRPNFNAFVVNIGDTFMALSNGRYKSCLHRAVVNNKTTRKSLAFFLCPKGDKVVSPPSELVNDLTPRIYPDFTWSMLHEFTQKHYRADMRTLEAFTKWIQQKSG* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4420 428 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 53 424 - -
Tpr2g4420 428 Pfam non-haem dioxygenase in morphine synthesis N-terminal 110 216 IPR026992 -
Tpr2g4420 428 Pfam 2OG-Fe(II) oxygenase superfamily 275 372 IPR044861 -
Tpr2g4420 428 Gene3D - 81 410 IPR027443 -
Tpr2g4420 428 SUPERFAMILY Clavaminate synthase-like 84 412 - -
Tpr2g4420 428 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 53 424 - -
Tpr2g4420 428 PRINTS Isopenicillin N synthase signature 133 150 - -
Tpr2g4420 428 PRINTS Isopenicillin N synthase signature 297 318 - -
Tpr2g4420 428 PRINTS Isopenicillin N synthase signature 332 358 - -
Tpr2g4420 428 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 273 372 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4420 Tpr-Chr2 48382899 48385178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4420 89 413 Glycosyltransferase AT5G59530 27.844 1.40e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4420 K05282 - gmx:100305378 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4420 2 48382899 48385178 Tpr2g4420 2 48382899 48385178 ECH
Tpr2g4420 2 48382899 48385178 Tpr1g0687 1 5819243 5822249 PCT