Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0687 ATGGCAATAAACTGCATAACAAGCATGCCTCAACCACCAACAAACCATGAAACCAAAGAACAAGAAAAACCACTAGTTTTTGATGCATCAATTTTCAAAAACCAAGTCAATCTACCAACACAATTCATTTGGCCTGATGAAGAACAAGCTTGTTTAAATATTCCTGAACTCGATGTACCATTTATCGACTTGGGAGGTTTTCTCTCAGGTGATCCACTTGCAGCAATGGAAGCATCAAAGGTTGTTGGTGAAGCATGTCAAAAACATGGTTTTTTTCTTGTTGTCAATCATGGTATTGATCAAAAGTTAATCTCTGATGCTCATGTTTTCATGGATGACTTTTTTGAGCTTCCCCTGTTTCAAAAACAGAGAGCTCAGAGAAAAACAGGGGAACACTGTGGTTATGCTAGTAGTTTCACTGGCAGATTCTCTTCTAAACTTCCTTGGAAAGAGACACTTTCTTTTCAATTCTCAGCTGATGAAAAATCACCAAATCTTGTCAGAGACTATCTGTGCAATACAATGGGCAATGAGTATCAGCAATTTGGGGAGGTTTATCAGGACTATTGCAAAGCCATGAGCAATCTTTCTTTAGGTGTAATGGAGCTTCTAGGAATGAGCCTTGGAGTTGGTAAAGCATATTTTAGGGAATTCTTTGAAGAGAACAGTTCAATAATGAGGCTCAATTACTATCCTACTTGTCAAAAACCTGAGCTTACTTTAGGTACTGGACCTCATTGTGATCCAACATCATTAACAATTCTTCACCAGGATCAAGTAGGTGGCTTGCAAGTTTATGTTGATGATCAATGGCATTCCATTACTCCACATTTCAATGCTTTTGTTGTCAATATTGGTGATACCTTCATGGCACTTTCAAATGGGAGATACAAGAGCTGCTTGCATAGGGCAGTGGTAAACAGCGAAAAGACAAGAAAATCTCTTGCTTTCTTTTTATGTCCATTAAGTGATAAAGTGGTAACTCCACCATGTGAATTGGTGGACAATTATAACCCAAGGATCTACCCTGATTTCACATGGTCTATGTTGCTTGAATTCACTCAAAAGCACTATAGAGCTGATATCAAAACACTTGAAGCATTTGCCAACTGGATTCAACATAAAACCACATGA 1134 0.3818 MAINCITSMPQPPTNHETKEQEKPLVFDASIFKNQVNLPTQFIWPDEEQACLNIPELDVPFIDLGGFLSGDPLAAMEASKVVGEACQKHGFFLVVNHGIDQKLISDAHVFMDDFFELPLFQKQRAQRKTGEHCGYASSFTGRFSSKLPWKETLSFQFSADEKSPNLVRDYLCNTMGNEYQQFGEVYQDYCKAMSNLSLGVMELLGMSLGVGKAYFREFFEENSSIMRLNYYPTCQKPELTLGTGPHCDPTSLTILHQDQVGGLQVYVDDQWHSITPHFNAFVVNIGDTFMALSNGRYKSCLHRAVVNSEKTRKSLAFFLCPLSDKVVTPPCELVDNYNPRIYPDFTWSMLLEFTQKHYRADIKTLEAFANWIQHKTT* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0687 377 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 16 374 - -
Tpr1g0687 377 PRINTS Isopenicillin N synthase signature 82 99 - -
Tpr1g0687 377 PRINTS Isopenicillin N synthase signature 246 267 - -
Tpr1g0687 377 PRINTS Isopenicillin N synthase signature 281 307 - -
Tpr1g0687 377 Pfam non-haem dioxygenase in morphine synthesis N-terminal 59 165 IPR026992 -
Tpr1g0687 377 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 16 374 - -
Tpr1g0687 377 Gene3D - 30 359 IPR027443 -
Tpr1g0687 377 Pfam 2OG-Fe(II) oxygenase superfamily 224 321 IPR044861 -
Tpr1g0687 377 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 222 321 IPR005123 -
Tpr1g0687 377 SUPERFAMILY Clavaminate synthase-like 31 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0687 Tpr-Chr1 5819243 5822249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0687 18 371 Glycosyltransferase AT5G59530 28.926 1.80e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0687 K05282 - gmx:100816992 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0687 1 5819243 5822249 Tpr1g0687 1 5819243 5822249 ECH
Tpr2g4420 2 48382899 48385178 Tpr1g0687 1 5819243 5822249 PCT