Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4349 ATGTCTGGGAGAGATCTAGAGAGAGAAGGGGCAAACAAGAACAATTATTCTTCTTCTTATGTTCCTCCTCCTAGTTCACATGTTTATGATCATGAAACTAGTTGGACATCATGGATTGTTCCTTTGTTTGTTGTTGCTAATCTTGTTGTTTTTGTTTTAGCTATGTATATTAATAATTGTCCTAGTAAAAATCCTGGTTTTCAAGGTGATTGTGTTTTGAAGTTTCTTGGGAGATTCTCTTTTCAGCCTCTTAAACAGAATCCTTTGTTTGGTCCTTCTTCTTCAACACTAGCGAAGATGGGAGCCCTTAAGTGGGATGATGTTGTGAATCATCACCAAGGATGGAGACTCGTGACATGCATTTGGTTACATGCTGGAATTATTCATTTGGCAGCAAACATGATTAGTCTGGTCTTCATTGGCATTCGCCTTGAACAACAATTTGGGTTCGTGAGGATAGGAATCATTTACCTAGTATCTGGATTTGGTGGGAGTGTTTTGTCTTCTCTATTCATTAGAAACAACATCTCTGTTGGTGCTTCGGGCGCTCTATTTGGACTTCTTGGAGCAATGCTTTCAGAACTTATCACAAACTGGAGTATTTATACCAATAAAGTAGCTGCTTTGATCACACTTCTGTTTATTATCGTCATCAATCTTGCGATTGGAATGTTGCCACATGTTGACAATTTTGCACATATCGGGGGATTCCTGACAGGCTTTCTCCTTGGTTTCATTTTCCTTCCGCGTCCTCAATTTGGGTGGTTAGCGCAACGCCACGTTCCTGCTGGTGCTCGCCTCAAGTCTAAGTACAAGGTTTACCAATATGTTCTATGGATAGTATCTGTTATTCTATTGATTGCCGGGTTATCCATTGCTTTAGTGATGCTATTACGAGGCGAAAACGGATATGATCACTGCCATTGGTGTCGGTATCTAACATGTGTTCCAACTTCTAAATGGAAATGCGACGAGAGTTAA 981 0.4016 MSGRDLEREGANKNNYSSSYVPPPSSHVYDHETSWTSWIVPLFVVANLVVFVLAMYINNCPSKNPGFQGDCVLKFLGRFSFQPLKQNPLFGPSSSTLAKMGALKWDDVVNHHQGWRLVTCIWLHAGIIHLAANMISLVFIGIRLEQQFGFVRIGIIYLVSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELITNWSIYTNKVAALITLLFIIVINLAIGMLPHVDNFAHIGGFLTGFLLGFIFLPRPQFGWLAQRHVPAGARLKSKYKVYQYVLWIVSVILLIAGLSIALVMLLRGENGYDHCHWCRYLTCVPTSKWKCDES* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4349 326 SUPERFAMILY Rhomboid-like 36 252 IPR035952 -
Tpr2g4349 326 Pfam Rhomboid family 110 251 IPR022764 GO:0004252|GO:0016021
Tpr2g4349 326 PANTHER RHOMBOID-LIKE PROTEIN 3 1 325 - -
Tpr2g4349 326 PANTHER RHOMBOID-RELATED 1 325 IPR002610 GO:0004252|GO:0006508|GO:0016021
Tpr2g4349 326 Gene3D - 30 250 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4349 Tpr-Chr2 47265977 47269501 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4349 - - gmx:100813345 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0716 1 6057737 6059749 Tpr2g4349 2 47265977 47269501 ECH
Tpr2g4349 2 47265977 47269501 Tpr2g4349 2 47265977 47269501 ECH