Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0716 ATGAATTCTAGGAGAGATGTTGAAAGTGGAGGGACAAAAAACAGAACAGGGGACAACAACAACGATTACTCTGCACCACCTGCTTCTTCCTATGTTTATGATGATGATGCTGAAAATCATCATAGAAATTCATGGCTTGTACCTCTTTTTGTGTTTATTAATGTTGTTGTTTTCATTGTAGCCATGGGCATCAACAATTGTCCCCATAACACTTTCGGTTTTCAAGGTGATTGTGTTGCTAGGTTCCTTGGCAGGTTCTCTTTTCAACCTTTCAGGGAAAACCCATTGCTTGGTCCTTCTTCTTCAACATTAACCAAAATGGGAGCTCTTAGATGGAATAATGTTGTGCACCAGCATCAAGGATGGAGACTTTTCACTTGTATTTGGTTACATGCTGGAATTATTCACTTGCTATCAAACATGGTCAGCCTTGTGTTTATCGGAATTCGCCTCGAACAACAATTTGGGTTTGTCAGGATTGGATTGATATACCTATTATCTGGATTTGGTGGAAGTGTACTTTCTTCTCTTTTTATTCGAAACAACATCTCCGTTGGTGCTTCTGGTGCTCTCTTTGGACTCCTTGGAGCAATGCTATCAGAACTTCTTACAAATTGGACTATATATTCCAATAAAGTGATGGCTTTGTTCACCCTTCTCATTATCATAGTCGTCAACCTCGCTATAGGCATTTTGCCGCACGTTGATAACTTTGCTCACATTGGGGGATTTGTGGTAGGATTTCTCCTTGGTTTCATTTTGCTGCCACGTCCTCAATACGGTTGGTTAGAGCAGCGACGTCTTCCTACTGGTATTCGCCTCAAGTCAAAATTCAAAGCTTACCAATATGTTCTAGGGATTGTCTCTCTAATTCTCTTGATTATTGGGTTATCAATTGGAACTGTGATGCTGTTCAAGGGTAAGAATGGATATGATCATTGCCATTGGTGTCATTATCTAACATGTGTGCCAAGCTCTAAATGGGAATGCAACAATGACAGTTAA 1005 0.401 MNSRRDVESGGTKNRTGDNNNDYSAPPASSYVYDDDAENHHRNSWLVPLFVFINVVVFIVAMGINNCPHNTFGFQGDCVARFLGRFSFQPFRENPLLGPSSSTLTKMGALRWNNVVHQHQGWRLFTCIWLHAGIIHLLSNMVSLVFIGIRLEQQFGFVRIGLIYLLSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELLTNWTIYSNKVMALFTLLIIIVVNLAIGILPHVDNFAHIGGFVVGFLLGFILLPRPQYGWLEQRRLPTGIRLKSKFKAYQYVLGIVSLILLIIGLSIGTVMLFKGKNGYDHCHWCHYLTCVPSSKWECNNDS* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0716 334 Pfam Rhomboid family 116 258 IPR022764 GO:0004252|GO:0016021
Tpr1g0716 334 PANTHER RHOMBOID-LIKE PROTEIN 3 5 332 - -
Tpr1g0716 334 SUPERFAMILY Rhomboid-like 40 259 IPR035952 -
Tpr1g0716 334 MobiDBLite consensus disorder prediction 1 26 - -
Tpr1g0716 334 Gene3D - 38 257 IPR035952 -
Tpr1g0716 334 PANTHER RHOMBOID-RELATED 5 332 IPR002610 GO:0004252|GO:0006508|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0716 Tpr-Chr1 6057737 6059749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0716 - - gmx:100813345 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0716 1 6057737 6059749 Tpr2g4349 2 47265977 47269501 ECH
Tpr1g0716 1 6057737 6059749 Tpr1g0716 1 6057737 6059749 ECH