Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4263 ATGGAAACACCATTGATAATTAAAAGCTTTAATTCAGAAAGTGATTATTTGGCAGTGAAAAGCTTGAAAGATGTTAAATATGTTTTGTGGAATGAAACAGTGAAGATATGGAAGATAGCACTTCCAGTGGCACTTTCTTTACTGTTTCAAAATCTCAACAACTCTTCAACTTCAATTTATGCTGGTCATCTTGGAGATATTGAACTCTCTTCTTTCTCTGTTTATCAAAGTGTCATCAATTCTATTTATTTCTCTATGCTGTATGGCATGTCAAATGCACTAGCAACACTATGTGGTCAAGCTTATGGCGCAGGACAATTTCGAAATGCTGGAATTTATCTTCAAAGATCATGGATAGTACTCTTAACAACTTGCATACTCCTCTTGCCAATTCAACTATATGCAACTCCAATCTTAAAATTTTTTGGCCAAGAAAAAGAAATAACCGATCTAGCAGGCAAATATGCTATTCTCGTAATTCCCTACATGTTTTCCTATGCTATCAATTTACCCCTTATGAAATTTCTTCAAGCACAAAGCAAAGTTAATGTGATTATGTACATATCAGTTGTGACATTGTTAATACAAAATGGTCTACTTTATATATTCATCAATGTATTTGATTTTGGAATAATTGGTTTAGCCATGGCAAGTAATATCTCAGGATGGATATTTTCTGTTGCATTAGTAATTTATGCAATTGGTTGGTGTAAAGAAGGTTGGAATGGATTATCTTTGAAGGCATTTAAGGAATTATGGGAATTTACTAAACTAAGTCTTGGTTCATCTGTAATGATATGTTTAGAACAATGGTATTCTGCTTGCATTATGCTTCTTGCTGGTCACCTTGATAATCCTGTCATTGCTGTTGGTTCCTTTTCAATTTGCCTTAATATTCAGGGTTGGAACTTGATGCTGCTTCTTGGAGTAAGTTCAGCAGTAAGTGTTCGTGTCTCAAATACACTTGGCATGTCACATCCAAGAGCAGCCAAATACTCTTTCTTGGTGACAATGTTTCAGTCTCTTCTCCTTGGAATCATTTTCATGACTGTAATTTTCTTGAGTAAACAAGAATTTCCTATGATCTTTACAAAGAGTGAGGATATGATACATGCTGCTAGTGAATTGGCATACCTTCTTGGTATAACCATGATTCTCAATAGTGTTGCACAAACTATATCAGGTGTGGTCATTGGTTGTGGATGGCAAGTTATGGTTGGTTACATAAACTTGGCATGTTATTACATTGTTGGACTCCCTATTGGAATTTTCCTTGGTTTCAACCAGCATTTAGGGGTCAAGGGTCTCTGGGGAGGCACAATGTGTGGCAGTGTTCTTCAGATTTTAGTCCTTGCAGTCATTATTTATAAGACCAATTGGACTAAGGAGGTAGAGCAAACTGCTGATCGCATGCGAACTTGGAGCACTAACAAGTAA 1437 0.3598 METPLIIKSFNSESDYLAVKSLKDVKYVLWNETVKIWKIALPVALSLLFQNLNNSSTSIYAGHLGDIELSSFSVYQSVINSIYFSMLYGMSNALATLCGQAYGAGQFRNAGIYLQRSWIVLLTTCILLLPIQLYATPILKFFGQEKEITDLAGKYAILVIPYMFSYAINLPLMKFLQAQSKVNVIMYISVVTLLIQNGLLYIFINVFDFGIIGLAMASNISGWIFSVALVIYAIGWCKEGWNGLSLKAFKELWEFTKLSLGSSVMICLEQWYSACIMLLAGHLDNPVIAVGSFSICLNIQGWNLMLLLGVSSAVSVRVSNTLGMSHPRAAKYSFLVTMFQSLLLGIIFMTVIFLSKQEFPMIFTKSEDMIHAASELAYLLGITMILNSVAQTISGVVIGCGWQVMVGYINLACYYIVGLPIGIFLGFNQHLGVKGLWGGTMCGSVLQILVLAVIIYKTNWTKEVEQTADRMRTWSTNK* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4263 478 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 472 - -
Tpr2g4263 478 CDD MATE_eukaryotic 32 466 IPR045069 GO:0042910|GO:1990961
Tpr2g4263 478 PANTHER PROTEIN DETOXIFICATION 1 472 - -
Tpr2g4263 478 Pfam MatE 42 200 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr2g4263 478 Pfam MatE 263 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr2g4263 478 TIGRFAM matE: MATE efflux family protein 42 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4263 Tpr-Chr2 45940020 45945465 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4263 K03327 - gmx:100789611 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4263 2 45940020 45945465 Tpr2g4263 2 45940020 45945465 ECH
Tpr2g4263 2 45940020 45945465 Tpr1g0775 1 6543768 6547389 PCT