Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0775 ATGGATACTCCTCTTCTCTACGGCACGGCGGAGTCGTCATCGTTAATATTGGAGGAACACGGCGGTGACTACGTGGAAGTGAAAGGATTTCAACAAGCGAAGAAAGTTTTCGCGATTGAAACAGTTAGAATATGGAAAATTGCGTTGCCGATAGTTTTTAACATTTTGTGTCAATACGGTGTTAATTCTATCACCAACATTTTCGTTGGTCATCTCGGTGACATTGAACTCTCTGCTGTTTCTCTCATTAATTCTGTCATTGGCACTTTCGCTTTTGGTTTCATGCTAGGTATGGGGAGTGCAACTGAGACGCTCTGCGGTCAAGCTTTTGGAGCTGGACAGGTTCATATGCTTGGTGTTTATATGCAACGGTCATGGATAATTTTATTGGTGACAAGTATTCTTCTATTGCCAATATATATTTTTGCTGCTCCAATTTTGAAACTACTTGGCCAACAGAAAGATATGGCTGATCTTGCTGGAAGTTTCGCACTTTTAGTAATTCCTCAATTTCTCTCACTTGCCTTCAATTTTCCAACCCAAAAGTTCCTTCAGGCTCAAAGTAAGGTTAATGTCATTGCATGGATTGGGTTAGTGGCTCTAATTTTGCATATTGGGCTGCTTTGGCTCTTGATTTATGTATTAGATTTAGGCTTAACCGGTGCAGCGATTGCATTCGATGTCACGAGTTGGGGAATTACGTTGGCTCAACTTGTTTATGTGGTGGGTTGGTGTAAGGATGGATGGAATGGATTGTCGTGGTTGGCTCTTAAGGATATATGGTCCTTTGTTAGGCTATCCATTGCGTCTGCTGTTATGCTTTGCCTTGAAGTTTGGTATATGATGAGCCTCATAGTTCTTGCCGGCCACCTTGATAATGCAATTATTGCCGTTGATTCCATCTCTATATGCATGAATTACAATGGATGGGAAGGCATGATCTTCATTGGAGTAAATGCAGCTATAAGTGTCAGAGTTTCCAACGAACTTGGACTTCGACATCCAAGAGCTGCCAAATACTCCGTCTATGTGACAGTCTTTCAATCTCTTTTCATTGGAATATTCTTCATGGGTGTTATTTTGCTAACTAAGGACTACTTTGCTATTGTTTTTACCAATAGCAAGACTTTGCAAGTGGCGGTTGCAAACCTAGGAAACCTCCTTGCGGTGACAATGGTTTTAAACAGCGTTCAACCGGTGATTTCAGGTGTTGCTGTTGGAGGCGGGTGGCAGGCCTTGGTGGCTTACATCAACGTAGGTTGTTATTACTTGTTTGGGCTTCCACTAGGGTACCTTCTTGGTTACACTGCAGAATTGGGGGTTAAGGGACTTTGGGGAGGTATGATATGTGGAATTCTCCTCCAGACCTTGCTGCTGATGGGGATACTTTACAAAACCAATTGGAATAAAGAGGTGGATAATACAACTGCGCGAGTGCAGCAATGGGGTGGACAAGCCATAGAAGTTGACAAGACATTGGCTTCTGCATAA 1491 0.4259 MDTPLLYGTAESSSLILEEHGGDYVEVKGFQQAKKVFAIETVRIWKIALPIVFNILCQYGVNSITNIFVGHLGDIELSAVSLINSVIGTFAFGFMLGMGSATETLCGQAFGAGQVHMLGVYMQRSWIILLVTSILLLPIYIFAAPILKLLGQQKDMADLAGSFALLVIPQFLSLAFNFPTQKFLQAQSKVNVIAWIGLVALILHIGLLWLLIYVLDLGLTGAAIAFDVTSWGITLAQLVYVVGWCKDGWNGLSWLALKDIWSFVRLSIASAVMLCLEVWYMMSLIVLAGHLDNAIIAVDSISICMNYNGWEGMIFIGVNAAISVRVSNELGLRHPRAAKYSVYVTVFQSLFIGIFFMGVILLTKDYFAIVFTNSKTLQVAVANLGNLLAVTMVLNSVQPVISGVAVGGGWQALVAYINVGCYYLFGLPLGYLLGYTAELGVKGLWGGMICGILLQTLLLMGILYKTNWNKEVDNTTARVQQWGGQAIEVDKTLASA* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0775 496 PANTHER PROTEIN DETOXIFICATION 36 478 - -
Tpr1g0775 496 Pfam MatE 50 209 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr1g0775 496 Pfam MatE 270 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr1g0775 496 PANTHER MULTIDRUG RESISTANCE PROTEIN 36 478 - -
Tpr1g0775 496 CDD MATE_eukaryotic 40 472 IPR045069 GO:0042910|GO:1990961
Tpr1g0775 496 TIGRFAM matE: MATE efflux family protein 50 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0775 Tpr-Chr1 6543768 6547389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0775 K03327 - gmx:100799559 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0775 1 6543768 6547389 Tpr1g0775 1 6543768 6547389 ECH
Tpr2g4263 2 45940020 45945465 Tpr1g0775 1 6543768 6547389 PCT