Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4228 ATGGGGGCTGGTATTTCTACCAATGATGATCATGAGGGATATCTTTCTTATTCAAAGACTTGTCTTGATGATATTCCAGAAAGTTGCATCTCTTCCATGATGATGAGATTGGATCCTAAAGAGATTTGTAAATTGGCTAGAGTTAACAAAACTTTTCATAGAGCTTCTTCTGATGACTATGTTTGGGAATCTAAGTTGCCACAAAGTTACAAGTTTCTTGTAAAAATAATTCTTGGTGAAGAAAAACTTTGTTCTATGACCAAGAAAGAGATCTATGCTAAACTATGTCAACCCAATTTCTTTGATGATGGTACAAAAGAAGCTTGGCTTGATAGATCTAGTGGACAAGTTTGTTTGTTCATTTCATCAAAATCTTTCAAGATAACTGGAATAGATGATAGAAGATATTGGAACTATATTTCTACTGAGGAATCAAGGTTTAAAAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTATTAGGAGAGTTAGAATTTGAGTTTCCAAAAGGGAACTATAGCATATTTTTCAAGCTTCAATTGGGCAAGACCACAAAGAGATTGGGTAGAAGAGTGTGCAATATTGAACAAGTACATGGTTGGGACATCAAACCTGTTAGATTCCAACTTTCTACATCTGACGGTCAGAATTCACTCTCTCAGTGTTATATGAATGGGCCTGGAGAATGGGCTTATTACCATGTTGGAGACTTTGTCAGTGAGAAGGCTAATGGGCCCATAAACATCAAGTTTTCTTTGGCCCAAATAGATTGCACACACACCAAAGGTGGTCTTTGCATAGATGGGGCAGTAATTTGTCCAAAGGAGTTAGCATATAAGTTGAAACAATTTTAG 858 0.3636 MGAGISTNDDHEGYLSYSKTCLDDIPESCISSMMMRLDPKEICKLARVNKTFHRASSDDYVWESKLPQSYKFLVKIILGEEKLCSMTKKEIYAKLCQPNFFDDGTKEAWLDRSSGQVCLFISSKSFKITGIDDRRYWNYISTEESRFKSVAYLQQMWWVEVLGELEFEFPKGNYSIFFKLQLGKTTKRLGRRVCNIEQVHGWDIKPVRFQLSTSDGQNSLSQCYMNGPGEWAYYHVGDFVSEKANGPINIKFSLAQIDCTHTKGGLCIDGAVICPKELAYKLKQF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4228 285 ProSiteProfiles F-box domain profile. 19 65 IPR001810 GO:0005515
Tpr2g4228 285 SUPERFAMILY F-box domain 19 100 IPR036047 GO:0005515
Tpr2g4228 285 Pfam Phloem protein 2 117 275 IPR025886 -
Tpr2g4228 285 SMART fbox_2 25 65 IPR001810 GO:0005515
Tpr2g4228 285 PANTHER F-BOX PROTEIN 1 285 - -
Tpr2g4228 285 PANTHER F-BOX PROTEIN PP2-A15 1 285 - -
Tpr2g4228 285 Gene3D - 15 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4228 Tpr-Chr2 45385489 45388680 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4228 - - gmx:100787859 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4228 2 45385489 45388680 Tpr1g0710 1 6021243 6030995 PCT