Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4053 ATGGCTGCCAAACGCGTTTATGAAGCATGGAAAGGAAGTAATAAATTCCTATTTGGAGGAAGGTTGATATTTGGGCCTGACGCTAAGTCATTGCTTTTCAGTTTATTGCTGGTCATAGCTCCAGTTGTCATCTTTTGTATATTTGTAGCAAGGCATCTTCGGCATGAGTTTTCCTCATATAATGCAGGATATGCTATTTTGGTGGTGGCAGTTCTCTTCAATATTTATGTGCTGATACTTCTCTTTCTCACTTCTGCACGCGATCCGGGCATTATACCGAGGAATTTACATCCACCAGAAGAAGAGTTCCGTTATGACTCGTCCGTTTCAATTGATATTGGGGGACGTCAAACACCAAGCCTTCAGTTCCCTCGAACAAAGGAAGTAATGGTCAATGGCCTTCCTGTAAGAGTGAAGTATTGTGATACCTGTATGTTATATCGTCCTCCTCGTTGCTCACATTGCTCCATTTGCAACAATTGTGTTGAACGTTTTGATCATCATTGCCCTTGGGTTGGCCAATGTATTGGACTGAGGAACTATCGTTACTTCTTTATGTTTGTTTCTTCGGCAACCCTTCTATGCATATATGTGTTTTCGTTCTCAGCTTATTACATCAAGGTTTTGATGGATGATAATCATGGGACAGTGTGGAAGGCAATGAAAGAATCCCCTGCATCTGTTGTCCTAATGGCATATTGTTTCATCTCTTTGTGGTTTGTTGGTGGACTAACTGGCTTTCATTTGTACCTTATTGGCACAAACCAGACCACTTATGAAAACTTTCGATACAGAGCAGATAACAGAACGAATGTTTACCATCGGGGTTGTTTAAATAATTTTCTGGAAGTATTTTGCACAGAAGTGAAACCTTCAAGGAACAATTTTCGGGCTCTTGTTCAAGAAGAAGAGGTACAGAGGCCACCTCCTCGGGTCGTTACCCGGGAACCTGAACAAGATTTGGTAGGAGATCCTCGTTCTAAGGTTGAAGATGATCTAGACATAGGTGAAGACCTATTAAAAATATCACAGCGCCGGAATATTGACGAAATTGATGAAGATATTCGGAGCAGAGGGAGCAATGGACCTTACAATAATGCATCTGAAGGTGATTCAGTTTTGGGCTCAGATCGTCGAGCTCCAACAGTTCGATCAGAAGAAAGGCACTCAAGTTGGAGAAGAAGTGGAAGCTGGGAAATTGCGCCAGATGTACTTGCCAATTCTAATGTAACTGAAACTAGAAGCTATGTTACTGCGCGTCAATGA 1266 0.4186 MAAKRVYEAWKGSNKFLFGGRLIFGPDAKSLLFSLLLVIAPVVIFCIFVARHLRHEFSSYNAGYAILVVAVLFNIYVLILLFLTSARDPGIIPRNLHPPEEEFRYDSSVSIDIGGRQTPSLQFPRTKEVMVNGLPVRVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSATLLCIYVFSFSAYYIKVLMDDNHGTVWKAMKESPASVVLMAYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADNRTNVYHRGCLNNFLEVFCTEVKPSRNNFRALVQEEEVQRPPPRVVTREPEQDLVGDPRSKVEDDLDIGEDLLKISQRRNIDEIDEDIRSRGSNGPYNNASEGDSVLGSDRRAPTVRSEERHSSWRRSGSWEIAPDVLANSNVTETRSYVTARQ* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4053 421 Pfam DHHC palmitoyltransferase 139 263 IPR001594 GO:0016409
Tpr2g4053 421 PANTHER S-ACYLTRANSFERASE 6 421 - -
Tpr2g4053 421 MobiDBLite consensus disorder prediction 303 329 - -
Tpr2g4053 421 MobiDBLite consensus disorder prediction 352 397 - -
Tpr2g4053 421 ProSiteProfiles DHHC domain profile. 139 189 - -
Tpr2g4053 421 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 421 - -
Tpr2g4053 421 MobiDBLite consensus disorder prediction 380 394 - -
Tpr2g4053 421 MobiDBLite consensus disorder prediction 308 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4053 Tpr-Chr2 42832578 42843297 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4053 65 309 Lipid Metabolism Gene Families AT4G22750 27.586 3.83e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4053 K16675 - gmx:100818705 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4053 2 42832578 42843297 Tpr1g0868 1 7377538 7381877 PCT