Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0868 ATGGCAGCAAAGCGCGTGTATCAAGTTTGGAAAGGAAGTAATAAATTCATATTTGGAGGGAGGTTGATATTTGGGCCTGATGCTAGGTCCTTGCTTATCACTTTGTCGCTGATTATTTTTCCAGTTATCATCTTTTGTGTATTTGTAGCAAGGCATCTTCGGCATGAATTTTCTTCATATTATTCAGGATATGCTATTTTAGTAGTGGCAATTCTCTTTACTATCCATGTCTTGGTGCTTCTCTGTCTTACTTCTGCACGTGATCCGGGTGTCATCCCCAGGAATTCACATCCACCAGAAGAAGAGTTTCGTTATGAGTCTTCTGGGGTAGGTGGACAACAAACGCCAAGCCTTCAGTTCCCACGAACAAAAGAAGTAATGGTCAATGGCCTTCCTGTAAAGGTGAAATATTGTGAAACTTGTATGCTGTATCGCCCTCCTCGTTGCTCGCATTGCTCCATATGCAACAACTGTGTTGAACGTTTCGATCACCATTGCCCTTGGGTGGGACAATGCATTGGACTGAGGAACTACCGTTACTTCTTTCTGTTTGTTTCTTCCGCAACTATTCTATGCATCTACGTGTTTTCTTTCTCGGCATTTTACATAAAGGTTCTGATGGATAATAATGATATTGGCACAGTGTGGAAGGCGATGAAAGAATCCCCCGCATCTGTGGTTTTAATGGCTTATTGTTTCATCTCTTTGTGGTTTGTTGGTGGACTATCAGGTTTTCATTTGTACCTTATCGGCTCAAACCAGACTACCTATGAAAACTTCCGTTATAGAGCTGATGGCAGGATCAATGTTTTTAATCAAGGCTGTTTAAATAATTTTCTGGAAGTGTTTTGCACAGAAATAAGACCCTCGAGGAACAATTTCAGGGATTTTGTTCAAGAGGAGGTACAAAGGCCGCTGACTACGGTCGTTGTCCGGGGACGTGAACCAGATGATTTAGGTGGAGATCGTCGTCCTAAGGTTGAAGATGATCTCGATATCGGTGAAGATTTATTGAAGATCTCACAGCGTAGGAATGTTGAAGAACTTGGCGAAGATATTCAAAGTAGAGGGAGCAATGGTGCGCCCTATAATACAGCTGAACCTGATTCAATTTTGTCATCAGATCATCGAGCTACCACAATACGATCTGATGCTAGGCACTCAAGTTGGGAAAGGAGTGGAAATTGGGAAATTGCACAAGATGTCTTTGCCAATTCAAATGTCACCGAAAGCAGAAATTATGTCACATCAAAGGAAGTACGCCAATGA 1269 0.42 MAAKRVYQVWKGSNKFIFGGRLIFGPDARSLLITLSLIIFPVIIFCVFVARHLRHEFSSYYSGYAILVVAILFTIHVLVLLCLTSARDPGVIPRNSHPPEEEFRYESSGVGGQQTPSLQFPRTKEVMVNGLPVKVKYCETCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFLFVSSATILCIYVFSFSAFYIKVLMDNNDIGTVWKAMKESPASVVLMAYCFISLWFVGGLSGFHLYLIGSNQTTYENFRYRADGRINVFNQGCLNNFLEVFCTEIRPSRNNFRDFVQEEVQRPLTTVVVRGREPDDLGGDRRPKVEDDLDIGEDLLKISQRRNVEELGEDIQSRGSNGAPYNTAEPDSILSSDHRATTIRSDARHSSWERSGNWEIAQDVFANSNVTESRNYVTSKEVRQ* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0868 422 MobiDBLite consensus disorder prediction 357 377 - -
Tpr1g0868 422 ProSiteProfiles DHHC domain profile. 136 186 - -
Tpr1g0868 422 Pfam DHHC palmitoyltransferase 136 261 IPR001594 GO:0016409
Tpr1g0868 422 PANTHER S-ACYLTRANSFERASE 6 421 - -
Tpr1g0868 422 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 421 - -
Tpr1g0868 422 MobiDBLite consensus disorder prediction 348 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0868 Tpr-Chr1 7377538 7381877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0868 65 286 Lipid Metabolism Gene Families AT4G22750 28.216 2.90e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0868 K16675 - gmx:100820208 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0868 1 7377538 7381877 Tpr1g0868 1 7377538 7381877 ECH
Tpr2g4053 2 42832578 42843297 Tpr1g0868 1 7377538 7381877 PCT