Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3936 ATGACCAAACATCAAACACCACCACCACCACCACCGTCAAACAGCACCAACCTTGCCTCATGTCTTGTCGCCACCATATTCTTAATCTTCATCTTCATAACAATCTTCACACTTTACTTCACACTTTTCAAACCACAAGATCCAAAAATCTCCGTCAGTGCCGTCCAACTACCATCCTTTAACGTCACAAATAACGGCACAACAATCAACTTCACTTTCTCACAATACTCTTCCGTTAAAAACCCTAACAGAGGAACTTTCTCACACTATGATAGTTCATTTCAGCTTCTTTACTATGGAAAACAAATCGGTTTCATGTTTGTTCCCGCCGGGAAGATTAGTTCTCGGAGAACTCAGTATATGGCTGCTACATTCACTGTTCAGTCTCTTCCTTTGGGCTTGGAGCCCAATGGGCCTGATGGGCTTAAAATGGGGCCCACTATGGAGATTGAATCTACAATGGAGATGGTTGGGAGAGTGAGAGTTTTGCATCTGTTCAGTCATCATGTGGAGGCTAAAGCTGAATGCAGAGTTGCCATTGCTGTATCTGATGGAGCTGTTTTAGGTTTTCATTGTTAA 579 0.4283 MTKHQTPPPPPPSNSTNLASCLVATIFLIFIFITIFTLYFTLFKPQDPKISVSAVQLPSFNVTNNGTTINFTFSQYSSVKNPNRGTFSHYDSSFQLLYYGKQIGFMFVPAGKISSRRTQYMAATFTVQSLPLGLEPNGPDGLKMGPTMEIESTMEMVGRVRVLHLFSHHVEAKAECRVAIAVSDGAVLGFHC* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3936 192 Pfam Late embryogenesis abundant protein 78 176 IPR004864 -
Tpr2g3936 192 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 10 192 - -
Tpr2g3936 192 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 10 192 - -
Tpr2g3936 192 SUPERFAMILY LEA14-like 28 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3936 Tpr-Chr2 41997686 41998724 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3936 - - cam:101503027 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3936 2 41997686 41998724 Tpr2g3936 2 41997686 41998724 ECH
Tpr2g3936 2 41997686 41998724 Tpr3g0550 3 5483122 5483945 PCT