Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3877 ATGAAGTTGTTTATTCAAACAGAAATTTGCAGAATGGAACTCATTTACCAGAAAGGGAGTTTATCACCCATGGTTTTAGGGAAGGTAGAGTCAAACACAAGGGAAGGTGCATGTTTTAAATTGTCTTCCCTTTCTAGTGGTTCAGTCCATTACCAATTTTTGCATAAAGATAGAGAGATAGTAAGACATAGACGAGGTAGAAGAGTTATTGTTGCCACTGGACCTGCCATAGAGGCTCCTGTTATTGCCACTGAACCATTAACAAAAGATGATCTAATTCACTACATGGTATCTGGTTGCAAGCCTAAGGAAAAGTGGAGAATAGGCACAGAACATGAGAAGTTTGGTTTTGAATTTGATACTTTACGTCCAATCAACTACAAACAAATATCAGCTCTACTCAATGGCATTGCTGTGAGGTTTGATTGGGATAAAATTATGGAAGGTGACAACATCATAGGACTCAAAACTGGGAAACAAAGCATATCATTGGAGCCTGGTGGTCAAATTGAGCTTAGTGGTGCACCTTTCAAAACATTGCATCAAACTTATGATGAGATTAATTCACACCTCTATCAGGCTAAAACTGTTGCAGAGGAAATGGGAATTGGATTTTTGGGGTTAGGTTTTCAGCCTAAATGGAGACTGCAAGACATACCACAAGTGCCCAAGGTACGTTATGACATTTTGAAAAATTACTTCAGTAAATTTGGGTCTCTTGGTATTCACTCATTGTTAATGACATGTTCTATTCAGGTGAACTTGGACTTCAGTTCTGAAGCAGACATGATCAAGAAAATGCGCGCAAGTCTCGCGTTGCAGCCTTTAGCAACAGCCTTATTTGCAAATTCACCTTTCAAGCAAGGATTTCCGAATGGTTATGCCAGCTTTAGAAGCTACCTGTCCGGTCAAATTGATAAACGTCGTACCGGAATGCTCCCATTTGTTTTCAATGATACTTTTGGGTTTGAGCAGTTTGTTGATTATGCTCTTGATGTACCGATGGTATTTGTTTATCGAAAAAATAAATATATCGCTTGTGGTGGCATGTCATTCCGGGACTTCATGGCTGGTAAACTTCCTGCCATTCGAGGTCAAGTGCCAACAATCAGTGACTGGGAAAATCACCTCACAACTATATTTCCTGAGGTGAGGCTAAAGAGATACATGGAAATGAGAGGTGCTGATGGGGGGCCTTTGAGTATGCTATGTGCTCTACCTGCTTTTTGGGTAGGTCTACTATATGATGAGGTTTCACTACATAATGTTCTAGATATGATTGCTGATTGGACCGCTGAAGACAGAGAATATTTAAGAAATCAGGTTCCTTTTACTGGTTTGAAGACTCCATTTCAAGGTAGATTGTTGCAACAAGTTGCTGAAGATGTGTTGAAGTGGGCAAAGGATGGCTTGGAAAGAAGGTGCTTAAATGAATCAATTTTTCTGGATCCATTGATTGAAGTGGTTGGAACAGGTGTAACACCAGCTGAGAAGCTTTTGGATATGTACAATAACAAGTGGGTAAATAACATAGATCATGTGTTCAGAGAGTGTTGCTACTGA 1563 0.398 MKLFIQTEICRMELIYQKGSLSPMVLGKVESNTREGACFKLSSLSSGSVHYQFLHKDREIVRHRRGRRVIVATGPAIEAPVIATEPLTKDDLIHYMVSGCKPKEKWRIGTEHEKFGFEFDTLRPINYKQISALLNGIAVRFDWDKIMEGDNIIGLKTGKQSISLEPGGQIELSGAPFKTLHQTYDEINSHLYQAKTVAEEMGIGFLGLGFQPKWRLQDIPQVPKVRYDILKNYFSKFGSLGIHSLLMTCSIQVNLDFSSEADMIKKMRASLALQPLATALFANSPFKQGFPNGYASFRSYLSGQIDKRRTGMLPFVFNDTFGFEQFVDYALDVPMVFVYRKNKYIACGGMSFRDFMAGKLPAIRGQVPTISDWENHLTTIFPEVRLKRYMEMRGADGGPLSMLCALPAFWVGLLYDEVSLHNVLDMIADWTAEDREYLRNQVPFTGLKTPFQGRLLQQVAEDVLKWAKDGLERRCLNESIFLDPLIEVVGTGVTPAEKLLDMYNNKWVNNIDHVFRECCY* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3877 520 PANTHER GAMMA GLUTAMYL CYSTEINE SYNTHETASE 96 520 - -
Tpr2g3877 520 SUPERFAMILY Glutamine synthetase/guanido kinase 98 506 IPR014746 GO:0003824
Tpr2g3877 520 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 86 520 IPR011556 GO:0004357|GO:0006750
Tpr2g3877 520 Pfam Glutamate-cysteine ligase family 2(GCS2) 140 430 IPR006336 GO:0004357|GO:0042398
Tpr2g3877 520 Gene3D - 72 520 - -
Tpr2g3877 520 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 96 520 IPR035434 GO:0004357|GO:0006750
Tpr2g3877 520 PIRSF GCL 74 520 IPR035434 GO:0004357|GO:0006750
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3877 Tpr-Chr2 41530701 41535165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3877 K01919 - gmx:100775188 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3877 2 41530701 41535165 Tpr2g3877 2 41530701 41535165 ECH
Tpr2g3877 2 41530701 41535165 Tpr3g0650 3 6342395 6349570 PCT