Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3859 ATGTTGTTTCATTTTAATATTTCTAAATATTTGACTTGTCTCAATTTCCTAAATTTTCAAAAACAAACCACATTTTTCTTTTTCAACATATTCACGCGGAATGAATCAAACCAAAAAAAATATGTTATATATAAAACCTACATCTCATTCATTTTTTCCTTAAACTCCTCTCTCAACAACAAAATGGCCATCATCATGAAAAGAAATTTCTCCATTTTCCTCTTCATCGCCATAACATCCATCGCCGCAGCACAAGCCGGAAGTTTCAACATCACAAACAAATGCAACTACACCGTATGGGCCGCAGCCTTTCCAGGCGGTGGAGTAAAACTCAACACTGGCGAATCATGGAACATGAACATAACCAATGGTACAAGTAACGCAAGAATTTGGGGTCGAACCAATTGCACGTTCGACAACTTAGGTTTAGGAAAGTGTCAAACCGGTGATTGTAACGGAACACTTGCGTGTCAAACAATTGGTACACCACCAAACACAATCCTAGAATTTAGTTTGAACGCGTATAATGATCTCGATTTCTACGATGTTTCTCTTGTACAAGGTTTCAACATCCCAATTAAGTTGACACCGTCATTTAATTCTTGTGGTACCGTTAATTGTACCGCTGATATTATCGAAGAGTGTCCTACTCAACTTCAGGTACCAGGTGGTTGTAACAATCCGTGTACGACGTTTAATACACCTGAATATTGTTGCAACTCTGTTGCTCGTTCCGCCGTTGTTGCTACCAATGCCTCTGCTACTTGTGCACCAACTAGTTACTCAAAATTCTTTAAGGAGAGGTGCCCTTATGCTTATAGTTACCCTAAAGATGATGCAACAAGCACATACAGTTGTATGGGAGGAACAACTTATGATGTTGTGTTTTGTCCTTAA 897 0.3868 MLFHFNISKYLTCLNFLNFQKQTTFFFFNIFTRNESNQKKYVIYKTYISFIFSLNSSLNNKMAIIMKRNFSIFLFIAITSIAAAQAGSFNITNKCNYTVWAAAFPGGGVKLNTGESWNMNITNGTSNARIWGRTNCTFDNLGLGKCQTGDCNGTLACQTIGTPPNTILEFSLNAYNDLDFYDVSLVQGFNIPIKLTPSFNSCGTVNCTADIIEECPTQLQVPGGCNNPCTTFNTPEYCCNSVARSAVVATNASATCAPTSYSKFFKERCPYAYSYPKDDATSTYSCMGGTTYDVVFCP* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3859 298 PRINTS Pathogenesis-related protein signature 88 100 IPR001938 -
Tpr2g3859 298 PRINTS Pathogenesis-related protein signature 107 116 IPR001938 -
Tpr2g3859 298 PRINTS Pathogenesis-related protein signature 129 140 IPR001938 -
Tpr2g3859 298 PRINTS Pathogenesis-related protein signature 142 171 IPR001938 -
Tpr2g3859 298 PRINTS Pathogenesis-related protein signature 179 195 IPR001938 -
Tpr2g3859 298 PRINTS Pathogenesis-related protein signature 288 297 IPR001938 -
Tpr2g3859 298 SUPERFAMILY Osmotin, thaumatin-like protein 88 298 IPR037176 -
Tpr2g3859 298 SMART tha2 89 298 IPR001938 -
Tpr2g3859 298 PANTHER OS03G0233200 PROTEIN 63 298 IPR001938 -
Tpr2g3859 298 ProSiteProfiles Thaumatin family profile. 86 298 IPR001938 -
Tpr2g3859 298 Gene3D Thaumatin 87 298 IPR037176 -
Tpr2g3859 298 Pfam Thaumatin family 93 298 IPR001938 -
Tpr2g3859 298 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 63 298 - -
Tpr2g3859 298 ProSitePatterns Thaumatin family signature. 142 157 IPR017949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3859 Tpr-Chr2 41388967 41390193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3859 72 298 Receptor kinase-like Gene Family AT5G38280 35.743 1.72e-43 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3859 - - gmx:100037479 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3859 2 41388967 41390193 Tpr2g3859 2 41388967 41390193 ECH
Tpr2g3859 2 41388967 41390193 Tpr3g0678 3 6548306 6549190 PCT