Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3852 ATGTACAATTTTCATTTCATCTCTTCTCTTTTTTATGAAACCCTTTTCACTTTTCCCTTTCCATCATTCAACAATCTCAATTTCAATCCCAGTTTCAATTTCATGGGTCTTCGATTCTCTTCCTTTCTATCAAACTCAACCGTTTCTTCCGGTCCCACTCTCGGTGAGTTACCGGAAAGTTGCGTCGCTTCCATCATCGCTTACATGGATCCTCCTCAGATCTGTCAACTTGCTACCTTGAATCGTGCTTTTCGTGCTGCTTCTTCTGCTGATTTTGTTTGGGAATCTAAATTGCCACCCAATTATCTTCTTCTTCTCGCCAAAATTTTTCAAGATTTTCCGATCAATTTGGGTAAACGTGATATTTATACATCTCTTTGTCGTCTCAATTCTCTCGATGGTGGCACCAAGAAAGTTTGGGTTGATAAAGGCACGGGTAAGCTTTGTTTGGCTATATCATCCAGCAAGGGACTGTCAATAACTGGGGTTGATGATAGGAGATATTGGAATTATATCATCACTGAAGAATCTCGGTTCAGTACTGTTGCATACCTTCAGCATACCTGGTGGTTTGAAGTGGACGGGGAAATTGACTTCCCATTTCCAGCTGGGACATATAGCTTATTCTTCAGAATACATCTAGGGCGAGCCTACAAGAGGTTTGGACGTCGGGTCTGCAATACTGAACATGTTCATGGGTGGGACAAAAAGCCTGTGCAATTCCAACTTTGGACTTCAGATGGGCAATACGTTGCCTCCCAATGTTTTCTGAAAGAACCTGGCAATTGGACTTTTTACCATGCAGGTGATTTCACGGTTGAGGATGGACATTCATCAACCAAAGTCAAGTTCTCTATGACTCAAATTGATTGCACACACACTAAAGGCGGTCTGTGTTTGGATTCTGCTTTTATTTACCCAAGCGAATTCAAAAAGAGCAAGGCGTTTTTGAACTGCTCCTAA 963 0.4174 MYNFHFISSLFYETLFTFPFPSFNNLNFNPSFNFMGLRFSSFLSNSTVSSGPTLGELPESCVASIIAYMDPPQICQLATLNRAFRAASSADFVWESKLPPNYLLLLAKIFQDFPINLGKRDIYTSLCRLNSLDGGTKKVWVDKGTGKLCLAISSSKGLSITGVDDRRYWNYIITEESRFSTVAYLQHTWWFEVDGEIDFPFPAGTYSLFFRIHLGRAYKRFGRRVCNTEHVHGWDKKPVQFQLWTSDGQYVASQCFLKEPGNWTFYHAGDFTVEDGHSSTKVKFSMTQIDCTHTKGGLCLDSAFIYPSEFKKSKAFLNCS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3852 320 Pfam Phloem protein 2 149 307 IPR025886 -
Tpr2g3852 320 ProSiteProfiles F-box domain profile. 51 97 IPR001810 GO:0005515
Tpr2g3852 320 PANTHER F-BOX PROTEIN PP2-A15 35 315 - -
Tpr2g3852 320 SUPERFAMILY F-box domain 48 123 IPR036047 GO:0005515
Tpr2g3852 320 PANTHER F-BOX PROTEIN PP2-A12 35 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3852 Tpr-Chr2 41330786 41334252 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3852 - - gmx:100788842 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3852 2 41330786 41334252 Tpr2g3852 2 41330786 41334252 ECH
Tpr1g0710 1 6021243 6030995 Tpr2g3852 2 41330786 41334252 ECH
Tpr2g3852 2 41330786 41334252 Tpr7g2194 7 28606985 28610469 ECH