Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3851 ATGTGCCAGTTATCATCATCATCATCAACCTCTGTCTCCACTTTCTGTGAAACCAATAACAACCAAACAAATAGTATATCCACAACCAAAATCAAAACACACAAAATCAAACCTGACATGTTATCACCATTGATCCCTAAATCCCCAACAATATTCAAACAAGACCAACCAAAAAAATCCCATTTTTCTCTTGCTCTAAATGAAGCCAAACACATTGCAAACATAGCATTACCTATGGTGTTAACAGGTTTATTACTTTACTCTCGTTCCATTATTTCCATGTTGTTTCTCGGTCGCGTTGGTGAACTCGCTTTAGCAGGCGGTTCACTTGCGATCGGGTTTGCTAACATCACCGGTTACTCTATTCTTTCTGGTCTTGCTATGGGAATGGAACCTATTTGTGGTCAAGCTTTTGGTGCTAAAAGATTCAAACTTCTTGGTCTTACAATGCAAAGAACAATGATTCTTCTTCTATTAACTTCAATTTTGATTTCATTCTTGTGGCTTAACATGAAAAGAATATTGCTTTTCTGTGGTCAACAAGAAGATATAGCAAATGTTGCACAATCTTACATTCTTTATTCTCTTCCTGATCTTGTAGCACAATCATTGCTACACCCTTTAAGAATCTATCTTCGAAGTCAATCGATAACGCTTCCTTTAACATATAGTGCTACTCTTTCTATTCTTCTTCATGTTCCTATCAATTATTTTCTTGTGGATTTTCTTCAATTAGGAATCAAAGGAATTGCTTTAGGTTCCGTTTGGACGAATTTCAACCTCGTTGTTTCGTTGATTATTTACATTTGGGTTTCTGGAACACATAAGAAAACATGGAATGGTTTTTCATCTGCTTGTTTTAAAGGATGGAAATCGCTTTTGAATTTGGCGATTCCAAGCTGCATTTCGGTTTGTCTCGAATGGTGGTGGTATGAAATCATGATTTTGATTTGTGGTTTATTGATTAATCCACAAGCAACTGTTGCATCAATGGGTGTTTTGATTCAAACAACTGCATTGATATACATTTTTCCATCTTCTTTGAGTTTTGGTGTTTCAACAAGAGTTGGAAATGAACTTGGTGCTGAAAATCCACAAAAAGCAAAACTTGCAGCAATAGTTGGACTCTGTTTCAGTTTTGTTTTAGGTTTCTCTGCTTTGTTCTTTGCGATTTCAGTTCGAAACATTTGGGCTTCAATGTTCACAAGTGATCCTCAAATCATTGCTTTAACTTCAATGGTGTTACCTATCATAGGACTTTGTGAGCTTGGAAATTGTCCGCAAACAACGGTTTGTGGTGTATTGAGGGGAACCGCGAGGCCTAAATTAGGCGCAAATATAAATTTAGGTTGTTTTTATCTGGTGGGAATGCCGGTCGCAGTTTGGTTGAGTTTCTTTGCTGGATTTGATTTCAAAGGTTTATGGTTTGGTCTTTTGGCTGCTCAAGGTTCATGTATGGTGACAATGTTGTTTGTTTTGCTTCGGACAAATTGGGAAAATCAAGTAGAAAGAGCTAAGGAGTTAACATCATCAGATTCAAGTGAAGAAGAACAAGAAGAAGAGAAAGGGTTGGTGAGTTCATCTTGTGACACAAAAGAGTCTTCTGATTCATTAGTTTGA 1620 0.3685 MCQLSSSSSTSVSTFCETNNNQTNSISTTKIKTHKIKPDMLSPLIPKSPTIFKQDQPKKSHFSLALNEAKHIANIALPMVLTGLLLYSRSIISMLFLGRVGELALAGGSLAIGFANITGYSILSGLAMGMEPICGQAFGAKRFKLLGLTMQRTMILLLLTSILISFLWLNMKRILLFCGQQEDIANVAQSYILYSLPDLVAQSLLHPLRIYLRSQSITLPLTYSATLSILLHVPINYFLVDFLQLGIKGIALGSVWTNFNLVVSLIIYIWVSGTHKKTWNGFSSACFKGWKSLLNLAIPSCISVCLEWWWYEIMILICGLLINPQATVASMGVLIQTTALIYIFPSSLSFGVSTRVGNELGAENPQKAKLAAIVGLCFSFVLGFSALFFAISVRNIWASMFTSDPQIIALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVWLSFFAGFDFKGLWFGLLAAQGSCMVTMLFVLLRTNWENQVERAKELTSSDSSEEEQEEEKGLVSSSCDTKESSDSLV* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3851 539 TIGRFAM matE: MATE efflux family protein 78 475 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr2g3851 539 Pfam MatE 299 462 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr2g3851 539 Pfam MatE 78 238 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr2g3851 539 CDD MATE_eukaryotic 68 504 IPR045069 GO:0042910|GO:1990961
Tpr2g3851 539 PANTHER MULTIDRUG RESISTANCE PROTEIN 47 519 - -
Tpr2g3851 539 PANTHER PROTEIN DETOXIFICATION 47 519 - -
Tpr2g3851 539 MobiDBLite consensus disorder prediction 505 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3851 Tpr-Chr2 41310374 41312962 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3851 K03327 - gmx:100811560 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3851 2 41310374 41312962 Tpr2g3851 2 41310374 41312962 ECH
Tpr1g0706 1 5988014 5990062 Tpr2g3851 2 41310374 41312962 ECH