Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0706 ATGTGTCATCTAAATTCTCAACCTCCTTGCAAATGCAATAATTCAAATTCTGAATATTTAGTTGTTTCAATCAAAGACACAAAAATTCCCAACAACAACAACATGATGACCAATCCACTTATCCAAAAAGATACAAACATAGAGAATCCATTTCCAACAATACAAATCCAAAAAACCCATCTTAGAGCTACCTTCAAAGAAGTAATTTCTATATCCAAAATTGCTTTTCCTATGATCCTAACCGGTCTCTTACTTTATTGTCGTTCGATGATCTCCATGCTCTTTCTTGGTCACCTCGGCGAACTTGCTTTAGCCGGTGGTTCACTCGCGGTCGGTTTTGCTAACATTACCGGTTACTCAATCCTCTCCGGTCTAGCCGTAGGGATGGAACCTATTTGTGGACAAGCCTTTGGTGCCAAAAGATTCACTCTCCTTGGTCTATGCTTACAAAGAACCATTCTCTTACTACTCTTAACTTCTATCCCTATTTCAATACTTTGGCTTTACACAAAACATATCCTTCTTTTATGTGGCCAAGAAGAATCTATAGCTACACAAGCTCAAATCTATCTTCTCTATTCCATTCCTGATCTCTTAGCACAATCTTTTTTACACCCTTTAAGAATTTACCTTAGAAGCCAATCCATTACTCTGCCTCTAACTCTTTGTGCTACTTTAGCAATTTTTCTTCACATTCCCATAAACTATTTTCTTGTTTCTCACCTCAACATGGGAATCAAAGGTGTTGCTTTAAGTGGGGTGTGGACAAATTTCAACCTTGTTGCTTCTTTGATTCTTTACATAGTTTTCTCTGGCACACACAAGAAAACATGGGGTGGTTTTTCATCACAATGTTTCAAACAATGGAAATCACTTCTCAATTTAGCTATCCCGAGTTGTCTTTCTGTTTGTCTCGAATGGTGGTGGTATGAAATCATGATTTTGTTATGTGGTTTGTTGATAAATCCAAGAGCAACCGTTGCTTCTATGGGAATTTTGATTCAAACTACTTCTTTACTCTATATTTTTCCATCATCAATAAGTTTTAGTGTTTCAACTAGAGTTGGTAACAAATTAGGAGCTCAAAAGCCATCAAAAGCAAAACTTTCTGCCATTGTAGGACTCTCTTGTAGCTTCATTTTGGGTTTGTTTGCTTTGGTTTTTGCCATAATGGTTAGGAACATTTGGGCTAGCATGTTCACTGAAGACAAAGAGATAATAAAAATTACATCTTTGGTGTTACCTTTAATAGGGCTATGTGAACTTGGTAATTGTCCTCAAACAACAGGGTGTGGGGTGCTAAGAGGAACAGCAAGGCCTAAAGTGGGTGCAAATATCAATTTTGGTAGTTTTTATATTGTTGGAATGCCAGTGGCAATTTGGTTAGCATTTTTTGTTGGGTTTGATTTTCAAGGATTGTGGCTTGGATTGCTTGTGGCACAAGGTACTTGTGCTGTGACTATGTTGGTGATTTTGAGTCAAACGGATTGGGATGGTGAAGCATTAAGAGCTAAGAATTTAACAAGAAGTGATGTTGTTGATGTTGATGACACCAAAGAAATTGATGAAGAGAAGTTACTTAAAGCTGAAATTAAGGAAGATTCTTCTTAA 1611 0.3706 MCHLNSQPPCKCNNSNSEYLVVSIKDTKIPNNNNMMTNPLIQKDTNIENPFPTIQIQKTHLRATFKEVISISKIAFPMILTGLLLYCRSMISMLFLGHLGELALAGGSLAVGFANITGYSILSGLAVGMEPICGQAFGAKRFTLLGLCLQRTILLLLLTSIPISILWLYTKHILLLCGQEESIATQAQIYLLYSIPDLLAQSFLHPLRIYLRSQSITLPLTLCATLAIFLHIPINYFLVSHLNMGIKGVALSGVWTNFNLVASLILYIVFSGTHKKTWGGFSSQCFKQWKSLLNLAIPSCLSVCLEWWWYEIMILLCGLLINPRATVASMGILIQTTSLLYIFPSSISFSVSTRVGNKLGAQKPSKAKLSAIVGLSCSFILGLFALVFAIMVRNIWASMFTEDKEIIKITSLVLPLIGLCELGNCPQTTGCGVLRGTARPKVGANINFGSFYIVGMPVAIWLAFFVGFDFQGLWLGLLVAQGTCAVTMLVILSQTDWDGEALRAKNLTRSDVVDVDDTKEIDEEKLLKAEIKEDSS* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0706 536 PANTHER MULTIDRUG RESISTANCE PROTEIN 47 517 - -
Tpr1g0706 536 TIGRFAM matE: MATE efflux family protein 77 474 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr1g0706 536 Pfam MatE 298 460 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr1g0706 536 Pfam MatE 77 237 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr1g0706 536 PANTHER PROTEIN DETOXIFICATION 47 517 - -
Tpr1g0706 536 CDD MATE_eukaryotic 67 501 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0706 Tpr-Chr1 5988014 5990062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0706 K03327 - gmx:100813022 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0706 1 5988014 5990062 Tpr2g3851 2 41310374 41312962 ECH
Tpr1g0706 1 5988014 5990062 Tpr1g0706 1 5988014 5990062 ECH