Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3788 ATGGATAGAACAAACAACTCTAATCATGATGTCCCTTTTTCTTATGTTTCCCTACCCATTGGACCCCACGAGGATGAAGCTCCGGTGGAGAGTCGCGGAAAATGGAAGGCGAGGCCTGTGGTATTTTGTGGATTGTTAGTGCTAGTTTCCTTGGTTGCATTCAATGGCTACAAGGGATCAAATGGAAATATAACAACATTAACTTCAAACGAAGATTTGAAACAAAAAACAATTCCTTCGCACAAATGGAAGCCGGTTTCACGTGGTGTTTCTGCAGGGGTGTCGGAGAAATCGAATAGGTTGTTCACCAAGAGCAACAACATTGGGGGGATGTTGTTTCCTTGGAACAATACTATGTTAGCATGGCAGAGAACAGCTTTTCATTTCCAACCGGAGGAGAATTGGATGAATGATCCTAATGGTCCATTGTACTACAAGGGTTGGTATCACTTCTTCTACCAATACAATCCAAATGGTGCATTTTGGGGAGACATAGTATGGGGACATGCCGTCTCAAGGGACTTAATTCATTGGATTCATCTTCCACTAGCAATGGTAGCAGATGAATGGTATGATCAAAATGGTGTATGGACAGGTTCCGCCACAATATTACCCAACGGTGATATCATCATGCTATACACCGGTGCCACAGACGCATTGGTACAAGTACAAAATCTTGCCTACCCGGCCGACCTTTCTGATCCACTCCTAATCGATTGGATCAAATACCCGAAAAATCCAGTTCTAGTCCCACCCCCTGAAATTGAGGTATACGATTTTCGTGATCCTACCACAGCCTGGCTTACCTCTCAAGGTAAATGGCGCATATCGATTGGTTCTAAAATGAACAAAACCGGCATTGCTTTAGTTTATGATACGAAAGATTTCAAGACTTTTGAGCGTATCGAAGGTATACTTCACGCTGTGCCAAAAACCGGCATGTGGGAGTGTGTTGATTTTTTCCCCGTGTCCACTAAGTTGGATATTGGGTTGGATACTTCTGCTAGAGGTGATGATGTGAAATATGTGATGAAAGTTAGCTTGGATGATGATAGACATGATTACTATGCTCTTGGAACTTATGACGAAAATGGTGTTGATTTCGTACCTGATGATACCAATAAGGATGTTGGTACTGGATTGAGATATGATTATGGTGTATTTTATGCTTCCAAGACATTTTATGATCAAAGTAAAGAGAGAAGAGTGTTGTGGAGCTGGATTGGAGAATCTGATAGTGAAGACGCCGATGTCGCCAAAGGTTGGGCATCACTCATGGGTATTCCAAGGACTATAGTGTTTGATAAAAAAACTGGTAGCAACTTACTTCAATGGCCTGTTGAGGAGGTGGAGAGATTGAGAATGAAAAGATGTAAGTTCCATAATGAGAAGGTGATGCCAGGGTCTGTGGTGTTACTAAATATTGGATCAGCATCACAGTTAGACATTGAAGCTGAGTTTAACATTGATAAAAAAGATATAGAGAAGATAAAGCAAACCAATGAGGAGTACAATTGTGAAACCAGTGGAGGAGCAGCTAATCGTGGTGCCTTAGGACCTTTTGGTCTATTGGTTCTAGCAGATGAAGGTCTTTCTGAATATACTCCTATTTACTTTTATGTTGTTAAAGGAAGCAATGGGAATCTCAAGACTTCATTTTGCTCTGATCAATCAAGGTCTTCTTTGGCAACTGATGTTGATAAGAGCATCTTTGGAAGCACTGTTCCAGTACTTGAAGGAGAGAAGCTATCTCTAAGAATATTGGTGGACCATTCTATAGTTGAAAGTTTTGCTCAAGGTGGAAGAACATGTGTGACTTCTAGGGTTTATCCAACAACAGCAATCTATGAAAATGCTCAATTGTTCTTGTTTAATAATGCTACTGAGGCCACTGTTACTGCTTCACTCAATGTTTGGCATATGAATTCTGCATTCATAAACGATAAACAAGTTAAATTGAAGAGTTAA 1968 0.407 MDRTNNSNHDVPFSYVSLPIGPHEDEAPVESRGKWKARPVVFCGLLVLVSLVAFNGYKGSNGNITTLTSNEDLKQKTIPSHKWKPVSRGVSAGVSEKSNRLFTKSNNIGGMLFPWNNTMLAWQRTAFHFQPEENWMNDPNGPLYYKGWYHFFYQYNPNGAFWGDIVWGHAVSRDLIHWIHLPLAMVADEWYDQNGVWTGSATILPNGDIIMLYTGATDALVQVQNLAYPADLSDPLLIDWIKYPKNPVLVPPPEIEVYDFRDPTTAWLTSQGKWRISIGSKMNKTGIALVYDTKDFKTFERIEGILHAVPKTGMWECVDFFPVSTKLDIGLDTSARGDDVKYVMKVSLDDDRHDYYALGTYDENGVDFVPDDTNKDVGTGLRYDYGVFYASKTFYDQSKERRVLWSWIGESDSEDADVAKGWASLMGIPRTIVFDKKTGSNLLQWPVEEVERLRMKRCKFHNEKVMPGSVVLLNIGSASQLDIEAEFNIDKKDIEKIKQTNEEYNCETSGGAANRGALGPFGLLVLADEGLSEYTPIYFYVVKGSNGNLKTSFCSDQSRSSLATDVDKSIFGSTVPVLEGEKLSLRILVDHSIVESFAQGGRTCVTSRVYPTTAIYENAQLFLFNNATEATVTASLNVWHMNSAFINDKQVKLKS* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3788 655 Pfam Glycosyl hydrolases family 32 N-terminal domain 128 446 IPR013148 -
Tpr2g3788 655 Gene3D - 459 641 - -
Tpr2g3788 655 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 37 648 - -
Tpr2g3788 655 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 37 648 - -
Tpr2g3788 655 SMART glyco_32 128 601 IPR001362 GO:0004553|GO:0005975
Tpr2g3788 655 ProSitePatterns Glycosyl hydrolases family 32 active site. 128 141 IPR018053 GO:0004553|GO:0005975
Tpr2g3788 655 Pfam Beta-fructofuranosidase, N-terminal domain 14 120 IPR021792 GO:0004564
Tpr2g3788 655 Pfam Glycosyl hydrolases family 32 C terminal 449 640 IPR013189 -
Tpr2g3788 655 Gene3D Glycosyl hydrolase domain; family 43 133 458 IPR023296 -
Tpr2g3788 655 SUPERFAMILY Arabinanase/levansucrase/invertase 122 447 IPR023296 -
Tpr2g3788 655 SUPERFAMILY Concanavalin A-like lectins/glucanases 446 645 IPR013320 -
Tpr2g3788 655 CDD GH32_Fruct1-like 134 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3788 Tpr-Chr2 40804787 40808824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3788 15 647 Glycoside Hydrolase AT1G12240 62.888 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3788 K01193 - gmx:100798772 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3788 2 40804787 40808824 Tpr5g2677 5 48986196 48992002 PCT