Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3574 ATGATGATGATGGTGAAGAAACCTCTATATTTAGCTCAAGGTTTAATGAAAATGAAGAAGTGGTATGGAGGCTTGTTGATCATAGCTTTAGGTATGATGTTGTTTCTACTGTATAATCTTAAAGGATTTCAGCCACAAAAGCATTTGACAAAACAAACTGCATACGATTTTTTCAATAGCCATTCACCACCAAATGATTCTATTAAAGGAAGCAACGATGTTGCAGTAGTAACCTCTTCCGATGAAGAACAGAAAATTGTACCAAAACCAACAAAAAGGCCACATTTGGTACATGTCGCAGGGCTTGATGATCTGTATGACACAAAAAATGTATCCGAAGGAGTGATGAATGTTGTACTTGTTTGGGCACATTTACGTTTGCTGCTTTCGAGGTCAGATGCTTTGCCTGAAATAGCTCAAGGAGTTAAAGAGGCTTCTGCAGCATGGAAAGAGTTGAAGTCCACTGTTGAAAGTGAGAAAGCATCTAAGATTAGTAAGATAGACAGCCCAGAAAATCTAAGCTGTCCTTTCTCTGTGATGATACTTAGCAAGACGATAGCAGATAGTGGAATCACTCTGGATCTCCCTTGTGGTTTGGTTGTAGATTCTTCTATTACACTGATTGGCATCCCTAATGGACAAAACAGTAGCTTTCAGATTGGCCTAGCTGGACAGGAGCTAGAAGAGGAACCAAATCCTCCAATTATCTTGCATTATAATGTGAGTCTTCCTGGAGAAAACATGACAGAGGAACCGTATATTGTTCAAAATACATGGACTAATGATTTTGGGTGGGGGAAAGAGGAAAGGTGTCCTGCTCGTAGTTCTGCTAACATCCGCAAAGTTGATGAGCTTGTTCTCTGCAATGTACAAGCTGTCAGAAATAACAACGACGAGAATGAAAATGTCGGTCAACCTACTAGTGATATACCTTCTAATATTTCCTCAGAAAGTGCACATAGAACTGCTAATTTCCCTTTTTCTGAGGGTAATCCTTTCACTGCCACATTGTGGGTTGGTTCAGAGGGATTTCATATGACTGTGAATGGAAGGCATGAAACATCTTTTGCATATAGGGAGAAGCTTGAACCATGGTTAGTCAGCAAAATTAAAGTAGCAGGCAGTTTAAGTCTATTATCCATTCTTGCTAAAGGTTTACCCGTCACCGAAGATAATGATATAGTTGTAGATGTTGAGAACCTGAAAGCTCCTTCTATCCCTAGGAAAAGGCTTGTTTTGTTGATCGGAGTATTCTCTACCGGTAATAACTTTGAGCGCCGAATGGCGCTGAGGAGGTCTTGGATGCAGTATGAGGCTGTACGTTCTGGTGAAGTTGCTGTCAGATTTTTTATCGGGCTTCATAAGAACAATAGAGTTAATTTGGAGTTATGGAGAGAAGCTCAAGCATATGGAGATATCCAGTTAATGCCTTTTGTTGATTATTATAGTTTGATTTCTTTGAAGACAATTGCAATCTGCATTATGGGGACAAAAATCATCCCTTCTAAATACATAATGAAAACAGATGATGATGCTTTTGTAAGGATTGATGAAGTTCTTTCCACCCTGAAAGGGAAGCCGTCTGAAGGCCTCTTGTACGGTCTAATATCTTCTAAATCATCTCCCGATAGGGATAAGGACAGCAAGTGGTACATCAGTGATGCGGAATGGCCACATGATACATACCCACCATGGGCACATGGCCCTGGCTATGTCATCTCTCGCGACATAGCAAAATTTGTTGTCTCTGGTCACCAGGAAAGAACACTCCAGTTCTTTAAATTAGAAGATGTTGCCATGGGCATATGGATTGAACAGTTTAAGAATAGTGGTAAAGAAGTGCACTATGAGAATGATGAGAGGTTTTTCAATGCTGGATGTGACTCAAATTATGTACTTGCACATTATCAAAGCCCGCGGATGGTGCTATGCCTGTGGGAGAAACTGCAGAAAGAACACAAGCCAGAATGCTGTGAATAG 1980 0.404 MMMMVKKPLYLAQGLMKMKKWYGGLLIIALGMMLFLLYNLKGFQPQKHLTKQTAYDFFNSHSPPNDSIKGSNDVAVVTSSDEEQKIVPKPTKRPHLVHVAGLDDLYDTKNVSEGVMNVVLVWAHLRLLLSRSDALPEIAQGVKEASAAWKELKSTVESEKASKISKIDSPENLSCPFSVMILSKTIADSGITLDLPCGLVVDSSITLIGIPNGQNSSFQIGLAGQELEEEPNPPIILHYNVSLPGENMTEEPYIVQNTWTNDFGWGKEERCPARSSANIRKVDELVLCNVQAVRNNNDENENVGQPTSDIPSNISSESAHRTANFPFSEGNPFTATLWVGSEGFHMTVNGRHETSFAYREKLEPWLVSKIKVAGSLSLLSILAKGLPVTEDNDIVVDVENLKAPSIPRKRLVLLIGVFSTGNNFERRMALRRSWMQYEAVRSGEVAVRFFIGLHKNNRVNLELWREAQAYGDIQLMPFVDYYSLISLKTIAICIMGTKIIPSKYIMKTDDDAFVRIDEVLSTLKGKPSEGLLYGLISSKSSPDRDKDSKWYISDAEWPHDTYPPWAHGPGYVISRDIAKFVVSGHQERTLQFFKLEDVAMGIWIEQFKNSGKEVHYENDERFFNAGCDSNYVLAHYQSPRMVLCLWEKLQKEHKPECCE* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3574 659 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE GALT1 107 651 - -
Tpr2g3574 659 Gene3D - 407 638 - -
Tpr2g3574 659 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 191 384 IPR001079 GO:0030246
Tpr2g3574 659 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 107 651 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tpr2g3574 659 CDD GLECT 192 381 IPR001079 GO:0030246
Tpr2g3574 659 Pfam Galactosyltransferase 425 608 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tpr2g3574 659 SUPERFAMILY Concanavalin A-like lectins/glucanases 192 384 IPR013320 -
Tpr2g3574 659 SMART Gal_bind_lectin_2 195 383 IPR001079 GO:0030246
Tpr2g3574 659 Gene3D - 189 382 - -
Tpr2g3574 659 Pfam Galactoside-binding lectin 192 382 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3574 Tpr-Chr2 38914329 38919115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3574 71 659 Glycosyltransferase AT3G06440 54.561 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3574 K20843 - gmx:100816729 1082.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3574 2 38914329 38919115 Tpr2g3574 2 38914329 38919115 ECH
Tpr2g3574 2 38914329 38919115 Tpr2g1988 2 23725291 23731189 PCT