Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1988 ATGCAGGAATATTGGTTCAATAATCGGATCATCAAGATGAAGAAATTGTATGGAGGAGTTCTGATTGCCTCATCATTTACACTTTTTATGCTTATGATCCTGCGATATGGGGTCATGAAAAATCCTATTGGCGAAGGTTATTTGACTATACCTGTCTTAATTAATGGAACTAATCCTCTAGAGTGGATAAATCCTGTGATTCCACCTGCTATTCAAAATCCAGCTGGTACTTCGCAAGTTATTTCTGCAGACATTTTAGTATCTAGCCTCTTCGCCAGGAACAACTTTTCCAAACAAGAGCAACAAAATCTGCAGACATGGAACCACTTGAAACACTTAATTGATCATGTTCAGGGTTTACCTAGTGCAGCAGAAGCTATCAAGGAGGCTGCGAGTGTATGGAATAGTCTTGTTTCCTCAGTTGAAGAGCAAAGGCAAGGTCATGCAAATGATAGTTCAAGAGCAAAAGAGAAACAGTGTCCCCATTTTCTTAATAAGATGAATTCTACTGAACTTGGTAATAGTAGTTACAGACTGCAAGTTCCTTGTGGTCTGACACAAGGTTCTTCCATTACTGTAATTGGCATTCCAAATGGTATTCTAGGTAATTTTCGGATAGACTTGACTGGAGATTCAATCCCTGGGGAGCCTGATCCCCCAGTTATTTTGCACTACAATGTTAGGCTTCATGGTGATAAAATCACTGAAGATCCAGTAATTGTTCAAAACACCTGGACAGTAGCTCATGATTGGGGTGAAGAGGAACGGTGTCCATCCCCTAAGTCCGAAGAGGTTAAAAAAGTTGATGAGCTGGAACAGTGCAATAAGATTGTAGGGAAGAACATTAGCCAACTTTACACGGGCGGCATGCATTCCCACACTTCAAGACAAATTTCAGCAACTGAAGAGCAATTAATTAAGAGAAAATACTTTCCTTTTAAGCAAGGTTACCCCTTTGTAGCAACTATTAGAGTGGGATCAGAGGGAATCCAGATGACAGTTGATGGAAAGCACATAACTTCATTTGCTTTTCGTGAAACTCTGGAGCCATGGCTTGTCAGTGAGATAAAAATTTCAGGGGATATAAAATTAGAATCTATTCTTGCAAGTGGTCTGCCTACATCAGAGGATTCAGAGCATATTGTTGATCTGGAATTATTGAAGTCAAGTCCTTTATCTGCACAGGCCCCATTGGATCTCTTCATTGGTGTTTTCTCTACAGCTAACAATTTTAAACGACGGATGGCTGTTAGAAGAACCTGGATGCAGTACAATGCAGTTAGATCAAATACAACAGCTGTGCGCTTCTTTGTTGGTTTGCATAAAAGCCAAATAGTTAATGAAGAACTGTGGAAAGAAGCACTAACATATGGAGACATACAGTTGATGCCATTTGTTGACTACTATAGCCTGATCACTTGGAAATCTTTAGCAATTTGCATTTTTGGGACGCAGGTTGTTTCAGCAAAGTTTGTCATGAAGACAGATGATGATGCATTTGTTCGTGTAGATGAAGTGCTAGGCTCTTTGCAGAGGATCAATGTGGATCGTGGGTTACTATACGGACTGATCAATTCAGATTCCGAACCTCATCGCAATCCTGACAGCAAATGGTACATCAGCCCAGAGGAATGGAGCGAAGGAACTTATCCTCCATGGGCACATGGTCCCGGGTATGTGGTCTCACATGACATAGCAAAAACAGTGTACAAGAAATACAGAGAGAGTCATTTGAAGATGTTTAAACTAGAAGATGTTGCAATGGGAATCTGGATTGCAGACATGAAGAAGGAAGGTCTAGAAGTTCGATACGAGAATGAGGCAAGAGTTTATAATGAGGGTTGCAAGGATGGTTATGTGGTTGCCCATTATCAGGGTCCTAGGGAGATGCTTTGTTTGTGGCACAAACTTCAGGAATTAAAACGCGCAACATGCTGTGGTGATAGAAGGTGA 1953 0.4086 MQEYWFNNRIIKMKKLYGGVLIASSFTLFMLMILRYGVMKNPIGEGYLTIPVLINGTNPLEWINPVIPPAIQNPAGTSQVISADILVSSLFARNNFSKQEQQNLQTWNHLKHLIDHVQGLPSAAEAIKEAASVWNSLVSSVEEQRQGHANDSSRAKEKQCPHFLNKMNSTELGNSSYRLQVPCGLTQGSSITVIGIPNGILGNFRIDLTGDSIPGEPDPPVILHYNVRLHGDKITEDPVIVQNTWTVAHDWGEEERCPSPKSEEVKKVDELEQCNKIVGKNISQLYTGGMHSHTSRQISATEEQLIKRKYFPFKQGYPFVATIRVGSEGIQMTVDGKHITSFAFRETLEPWLVSEIKISGDIKLESILASGLPTSEDSEHIVDLELLKSSPLSAQAPLDLFIGVFSTANNFKRRMAVRRTWMQYNAVRSNTTAVRFFVGLHKSQIVNEELWKEALTYGDIQLMPFVDYYSLITWKSLAICIFGTQVVSAKFVMKTDDDAFVRVDEVLGSLQRINVDRGLLYGLINSDSEPHRNPDSKWYISPEEWSEGTYPPWAHGPGYVVSHDIAKTVYKKYRESHLKMFKLEDVAMGIWIADMKKEGLEVRYENEARVYNEGCKDGYVVAHYQGPREMLCLWHKLQELKRATCCGDRR* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1988 650 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 177 370 IPR001079 GO:0030246
Tpr2g1988 650 PANTHER - 77 639 - -
Tpr2g1988 650 Gene3D - 393 619 - -
Tpr2g1988 650 Gene3D - 169 369 - -
Tpr2g1988 650 Pfam Galactoside-binding lectin 177 368 IPR001079 GO:0030246
Tpr2g1988 650 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 77 639 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tpr2g1988 650 SMART galectin_3 177 370 IPR001079 GO:0030246
Tpr2g1988 650 Pfam Galactosyltransferase 412 596 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tpr2g1988 650 CDD GLECT 177 367 IPR001079 GO:0030246
Tpr2g1988 650 SMART Gal_bind_lectin_2 181 369 IPR001079 GO:0030246
Tpr2g1988 650 SUPERFAMILY Concanavalin A-like lectins/glucanases 177 370 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1988 Tpr-Chr2 23725291 23731189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1988 13 646 Glycosyltransferase AT1G26810 63.084 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1988 K14413 - gmx:100782548 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1988 2 23725291 23731189 Tpr2g1988 2 23725291 23731189 ECH
Tpr2g3574 2 38914329 38919115 Tpr2g1988 2 23725291 23731189 PCT