Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3444 ATGTTACCGAAAATTGAAGGTGGTGGTGAAGAATTGTTAAAAGATGTTCAAACTGTAACAAAAACCCTTTCTAAGAATTCATCAAAACACAATGATCCAAAACCAAAACCTGATAAAGAAGATAATAATTTCAAAAAGGATAAGAAATCATCCATATGGAATTGGAAGCTATTAAGAGCACTTTCTCTTACTAAGAGTAAGAAATTTAATTGTTGTTTTTCTCTTCAAGTTCATTTCATTGAAGGGTTACCTTTGAGTTTCAATGATAAAACCCTTTGTGTTCATTGGAAGAGACGCGATCAACATTTCGTTACCCCTCCGGCCAAAGTAGTTCAAGGTTTTGCTAAGTTTCAAGATATTTTGAGCTGTACTTGTTCTATTGTTGGAAGTAAAGGTGGATCACACAATTCTGCTAAGTATGAAGCTAAGCATTTTTCGCTCTATGCTTCTGTGCTTGGTGTTCCTGAACTTGATTTAGGGAATCATCGTTTAGATATAACACGCTTGCTTCCACTTTCGTTGGAAGATCTCGAAGAGGAGAAGAACTCGGGGAAATGGAGTACAAGTTATAGATTATCAGGAAAGGCTAAAGGTGCTGTGATGAATGTGAGTTTTGGTTATATGGTGGTTGGTGATAACAATACTTGTGCTCCTAATGTATTGTCTTCGAGGCAAAATTGTATGGCTTTGAGTAAAACAGATGTGTATCCATGTCAGTATTTGTCTCAGGTTATAGATGAGGTGAAGGATCTTCATGAAGTATTGACATCAACAAATTCAGCAAGGGCCGGTTCAACAGATGTCATCTTGGATAAGAAATTTGATGATGAAAACACATGTAGTCCTCTGCACGAGAAACCTGAACTTGTACTAAAAGAGAATGTTGAGCCGATCAAATTAAATGTGTTTCAAGAAAACTTGGAGACAGGTGAGACAGTTGAGCCAGATGATATTTTTACACCCGAGTCTGTAAAAGAGAATTATAATGAATGTGATGGATTTTCTGTTGTTGATCAGGGTGTTGAGTTTTCATCAAATGAACATATTAAACTTGAGGAATCCATTGTAGAAGCTATTGTTGATAGTTCTAAGGAAAGCACTGTGGTACATGAATTTTCTAACAAAAAGGGTGAGTTATACACAAAAGAACTTCTCCTACAAGAAATAGAATCAGCTTTAAATTGTATCTTGGAGTTAGAGAAAGTGGCAGCAGAATCTCCTAATATTATGGAAGTTACATCTGAAAGTAAGTTCAGAAAGTCACACAGCTTGGAATCTTTGGATGATGTTACCGAATCAGTTGCTGGTGAATTTTTGAGTATGCTAGGTGTAGATGATAGTCCAACAGGCTTTAGTTCCGAAAGTGAGCCCGAGTCTCCGAGAGAGCGCCTTTTAAGACAGTTTGAGAAGGAAATTGGCTCCGAGGGCTTCTCTTTTTTTGATGATGATGGTGGTGATGACGATGATGGTGGTGGTGGTGATGATGAAGATGATCGTGGCTATGATGCATCTTTTGGATCTGAGCAGTGGAAGTTCTCTACAGGTATTAAGCCACCACCCATGCAGGAAGGGCTTGAAATTGAGGATGTGAAGAGAAAACTAAAGGGCGACATGCTAGAAGACATGGAAACAGAAGCCTTAATGCGGGAATGGGGTTTGAATGAGGAAGCATTTCAGCATTCTCCACCAAAAGGCTTTGCTGGTTTTGGAAGTCCAATACATCAACTACGTGAAGAGCCTCCTAGATTACCTCCTCTAGCAGAAGGGTTTGGTCCTTTCCTCCAAACAAAAGATGGGGGATTCCTACGGTCTATGAATCCCTCACTTTTTATGAATGCTAACAGTGGGGGGGACTTAATCATGCAGATTTCCAACCCTGTTGTTATGCCTACAGAAATGGGTTCAGGGATAATGGAGACTTTGCAGTATTTGGCATCAATCGGAATTGAAAAGCTTTCGTTGCAGGCAAACAAGTTTATGCCTCTCGAAGATATCACAGGGAAGACGATGCAACAAATATCATGGGAAGCTATGTCAAGCTTAGAGGGAAAAGACAGGCAATGTCATTTGCAGGATGATTATGTGCAAAGGGACTTGAAAGGGTCGTCATCTGGACTAAAGTCTGATGAGTTCATTTCAAGTTCAATTTGCAACCACAGAGATTCAGGTTTTTTTTCATTGGAAGATCTCGCTCCTTTGGCTATGGATAAAATGGAAGCACTTTCAATGGAGGGTTTAAAAATACAATCTGAGATGTCGGAAGAGGATGCGCCATCAAACATAATTGCACAATCCTTTGGAGATCTTCCTTGTATCCAAGCCAAGTGGGTTAACATTGGAGGTTCTCTTGGTTTGGATGGAGCCGCTGCTGTGCGGTTGTTGAATATTAAAGACACTGACGACGAAGTTGATGGGATAATGGGATTATCGTTAACGCTTGATGAATGGATGAGACTGGATTCATGTGAGATTGATGATATAGATAATATCAGTGAGCATACTCGCAAACTTCTTGCTGCACATCATGCCAAAACTTTTGACGTAATCCGTGAGAGTTCAAAGGAAAGGAAGAAACAAGGCAAAGGTCATGGAAGGAAATGCGGTTTGTTAGGAAACAATTTCACAGTAGCACTAATGGTGCAACTTCGTGATCCTCTGAGAAATTATGAGCCTGTTGGAACACCAATGCTAGGTCTTATACAAGTTGAGAGAGTGCTTGTCCCACCAAAGCAAAAGATTTACTTGAATGTGTGTCAAGTTGGGAACAATAGTGATGAGGATGATGATGAGTCTGAAATAAGAGCAAAGGTAGAGATGAAGGACACGAAAGAGGAGAGTAGTACTAAAGAAAGTGGCATTGATCAGTTCAGAATTACAGAAGTTCATGTTTCAGGTCTTAAGATTCAGTCACAAAAAAAGAAGCTTTGGGGTACATCAAATCAGCAACAATCTGGTTCCCGCTGGTTGATTGCTAATGGAATGGGCAAGAGTAATAAGAATCAATTTACAAAGTCTAAGGCTGCGCCTAAAGTTGGTGGTGATCAGGTCACCGCCACAAAGGTGCAACCTGGGGACACGTTGTGGAGCATATCATCTCGTATTTTTGGAGCACTGAATACACACATAAGAAATCCCAATATCATTATACCAAATGAATCTATATAA 3165 0.3968 MLPKIEGGGEELLKDVQTVTKTLSKNSSKHNDPKPKPDKEDNNFKKDKKSSIWNWKLLRALSLTKSKKFNCCFSLQVHFIEGLPLSFNDKTLCVHWKRRDQHFVTPPAKVVQGFAKFQDILSCTCSIVGSKGGSHNSAKYEAKHFSLYASVLGVPELDLGNHRLDITRLLPLSLEDLEEEKNSGKWSTSYRLSGKAKGAVMNVSFGYMVVGDNNTCAPNVLSSRQNCMALSKTDVYPCQYLSQVIDEVKDLHEVLTSTNSARAGSTDVILDKKFDDENTCSPLHEKPELVLKENVEPIKLNVFQENLETGETVEPDDIFTPESVKENYNECDGFSVVDQGVEFSSNEHIKLEESIVEAIVDSSKESTVVHEFSNKKGELYTKELLLQEIESALNCILELEKVAAESPNIMEVTSESKFRKSHSLESLDDVTESVAGEFLSMLGVDDSPTGFSSESEPESPRERLLRQFEKEIGSEGFSFFDDDGGDDDDGGGGDDEDDRGYDASFGSEQWKFSTGIKPPPMQEGLEIEDVKRKLKGDMLEDMETEALMREWGLNEEAFQHSPPKGFAGFGSPIHQLREEPPRLPPLAEGFGPFLQTKDGGFLRSMNPSLFMNANSGGDLIMQISNPVVMPTEMGSGIMETLQYLASIGIEKLSLQANKFMPLEDITGKTMQQISWEAMSSLEGKDRQCHLQDDYVQRDLKGSSSGLKSDEFISSSICNHRDSGFFSLEDLAPLAMDKMEALSMEGLKIQSEMSEEDAPSNIIAQSFGDLPCIQAKWVNIGGSLGLDGAAAVRLLNIKDTDDEVDGIMGLSLTLDEWMRLDSCEIDDIDNISEHTRKLLAAHHAKTFDVIRESSKERKKQGKGHGRKCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLGLIQVERVLVPPKQKIYLNVCQVGNNSDEDDDESEIRAKVEMKDTKEESSTKESGIDQFRITEVHVSGLKIQSQKKKLWGTSNQQQSGSRWLIANGMGKSNKNQFTKSKAAPKVGGDQVTATKVQPGDTLWSISSRIFGALNTHIRNPNIIIPNESI* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3444 1054 MobiDBLite consensus disorder prediction 27 45 - -
Tpr2g3444 1054 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 65 208 IPR019448 -
Tpr2g3444 1054 ProSiteProfiles LysM domain profile. 1017 1054 IPR018392 -
Tpr2g3444 1054 CDD LysM 1020 1050 IPR018392 -
Tpr2g3444 1054 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 17 1053 - -
Tpr2g3444 1054 MobiDBLite consensus disorder prediction 23 45 - -
Tpr2g3444 1054 ProSiteProfiles C2 NT-type domain profile. 61 209 IPR019448 -
Tpr2g3444 1054 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 17 1053 IPR039614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3444 Tpr-Chr2 37855573 37859689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3444 - - lja:Lj4g3v2179220.1 1185.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3444 2 37855573 37859689 Tpr2g3444 2 37855573 37859689 ECH
Tpr2g3444 2 37855573 37859689 Tpr5g0804 5 14206892 14211560 PCT