Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3420 ATGGCGAGCTTGCTTCGGAACACTTCATTACTCACACGCTCTCTATTCACCTCTCAGGGTTTGAAATTAGGAGTATCTAGCACTTTTCAGATATTGCCATTTTCATCTAAAGGTAGAAGGCGCTCTAAATCTGATGGAAGTGACTCAGGTGAAGATACCATGTCTAAGAAAGATTTGGCCCTTAAGCAAGCTCTTGATCAGATCACTTCTGCATTTGGAAAAGGATCTATCATGTGGCTTGGTCGCTCTGACACACCAAAAGATGTACCAGTAGTGTCTACCGGTTCTTTTGCTCTAGATATAGCACTCGGATGTGGCGGACTTCCAAAGGGACGTGTTGTGGAAATATATGGTCCAGAGGCTTCTGGGAAAACAACTCTTGCTTTACACGTGATTGCAGAGGCACAGAAGCAAGGAGGCTACTGTGTCTTTGTGGATGCTGAACATGCCCTTGATAAGACACTTGCGGAGTCTATTGGTGTGAATACTCAGAACTTGCTTCTGTCACAACCAGATTGTGGTGAACAAGCACTTAGTCTCGTCGACACGTTAATCCGTAGTGGTTCAATTGATGTAATTGTTGTCGACAGTGTGGCTGCTCTAGTTCCTAAGGGTGAGCTTGATGGTGAAATGGGTGATGCTCACATGGCAATGCAGGCTAGGTTGATGAGCCAGGCACTTCGAAAATTGAGCCACTCCTTGTCACTTTCTCAAAGTATATTGATTTTTATAAACCAGGTGAGGTCAAAGATTTCTACTTTTGGGGGATTTGGTGGGCCCACTGAAGTTACTTGTGGTGGTAATGCCTTGAAATTTTATGCTTCTGTGCGGCTTAATATTAAGAGGATAGGTTTTGTCAAGAAAGGTGAAGAGGTTGTAGGAAGCCAGGTTCTTGTCAAGGTTGTGAAGAACAAGCTTGCCCCTCCATTTAAAACTGCTGAGTTTGAGCTTCAATTTGGCAAGGGTATATGTCGAGAAGCAGAGATTATAAAGTTGAGCTTAAAATACAAATTCATCACAAAAGCTGGTTCTATGTATTACTATAATGAACATAATTTCCGCGGTGTGGATGCTCTCAAGAGTTTCCTGGCTGAGAATTATAGTGCTTTAGAAGAACTGGAAATGAAGATAAGGGAGAAGCTTTTAAAACCCGAGACAGACAAGGTAGCAGAGTCAGATGGAGATGTTACGGAAGAAATTGCTACCCTTGATTCTACCGACGAAGAAACCACAGCTGTTGTAGAAGCATGA 1251 0.4293 MASLLRNTSLLTRSLFTSQGLKLGVSSTFQILPFSSKGRRRSKSDGSDSGEDTMSKKDLALKQALDQITSAFGKGSIMWLGRSDTPKDVPVVSTGSFALDIALGCGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESIGVNTQNLLLSQPDCGEQALSLVDTLIRSGSIDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQSILIFINQVRSKISTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEEVVGSQVLVKVVKNKLAPPFKTAEFELQFGKGICREAEIIKLSLKYKFITKAGSMYYYNEHNFRGVDALKSFLAENYSALEELEMKIREKLLKPETDKVAESDGDVTEEIATLDSTDEETTAVVEA* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3420 416 PANTHER REPAIR PROTEIN RECA, PUTATIVE-RELATED 1 407 - -
Tpr2g3420 416 ProSitePatterns recA signature. 269 277 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Tpr2g3420 416 SMART AAA_5 110 284 IPR003593 -
Tpr2g3420 416 ProSiteProfiles RecA family profile 2. 257 328 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Tpr2g3420 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 323 IPR027417 -
Tpr2g3420 416 PANTHER RECA 1 407 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr2g3420 416 MobiDBLite consensus disorder prediction 38 55 - -
Tpr2g3420 416 Hamap Protein RecA [recA]. 57 384 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr2g3420 416 SUPERFAMILY RecA protein, C-terminal domain 325 380 IPR023400 -
Tpr2g3420 416 MobiDBLite consensus disorder prediction 36 55 - -
Tpr2g3420 416 ProSiteProfiles RecA family profile 1. 88 247 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Tpr2g3420 416 Gene3D - 87 389 IPR027417 -
Tpr2g3420 416 TIGRFAM tigrfam_recA: protein RecA 57 379 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr2g3420 416 Pfam recA bacterial DNA recombination protein 60 323 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr2g3420 416 PRINTS RecA protein signature 146 175 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr2g3420 416 PRINTS RecA protein signature 180 209 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr2g3420 416 PRINTS RecA protein signature 218 247 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr2g3420 416 PRINTS RecA protein signature 266 294 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr2g3420 416 PRINTS RecA protein signature 299 328 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr2g3420 416 CDD recA 56 383 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3420 Tpr-Chr2 37673684 37678700 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3420 K03553 - gmx:100781271 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3420 2 37673684 37678700 Tpr2g3420 2 37673684 37678700 ECH
Tpr2g3420 2 37673684 37678700 Tpr5g0757 5 13037578 13044666 PCT