Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2518 ATGGTTTATCTATATATTCTTATAGGAATTATACTTATAGCTTATTGTAGTTTATTGTTTGTTTTTGTTGTGTATGGTTCTACATCAAAGAAAAAGACAACAGGTTTAGAAATTAATGATTGTGTTAATATTAGTAGTGCAACAAAAAATGAAAAACTATTTCCTCAAGAAACCTCTGAAAGTATAGACATCATCATTGTAGGAGCTGGTGTTGCTGGTTCAGCCCTTGCTTACACACTCGGAAAGGATGGAAGAAGAGTGCACGTTATTGAGAGAGATTTAAGTGAACCTGACAGAATTGTCGGTGAATTGCTACAACCCGGAGGTTATTTAAAATTAGTTGAATTAGGTCTTGAAGATTGTGTAGAAGAAATTGATGCTCAAAAAGTCTTTGGCTATGCTCTTTATAAAGATGGAAAAAATACCAAACTTTCTTATCCCTTGAAAAAATATAATGTTGATATTTCTGGAAGAAGCTTTCACAATGGTCGTTTCATACAAAGAATGCGAGAGAAGGCTTCATCTCTTTCAAATGTAAGATTAGAACAAGGTACTGTCACATCTTTAATAGAAGAAAAAGGAACCATCAAAGGGGTATACTACAAAACCAAAAGTGGATTAGAGATCAAAGCAAATGCTCCACTTACCATAGTATGTGATGGTTGTTTTTCCAACTTAAGACGTTCTCTTTGCAACTCAAAGGTTGATGTACCATCTCATTTTATTGGTTTCATATTAGAGAAATGTGATCTTCCATATGCAAACCATGGACATGTTATCTTAGGTGATCCTTCTTCCATTTTGTTCTATCCAATCAGTAGCACTGAGATTCGATGTTTAGTTGATGTACCTGCTACAATCTTACCTTCTATTGGTAATGGCGACATGACACGTTATCTCAAAACAGTGGTAACACCCCAGATTCCACCGGAGCTACGACGTTCTTTTGTCGAAGCAATTGATAAAGGAAACATAAGAAGCATGCCAAATAAAAGCATGACAACATGTCCATATCCTAAACCAGGTGCTCTTCTAATAGGAGATGCTTTGAATATGCGCCACCCTTTAACCGGAGGAGGAATGACCGTGGCTTTGTCTGATATTGTTTTGCTAAGGGATCTTCTTAGACCTCTACATGATTTACATCATGCTTCAGCACATTGCAAATATCTTGAATCATTTTACATTTTGCGCAAGCCAGCAGCATCTACAATAAACGCATTAGCTGGTGCATTGTACAAGGTGTTTTGTGTATCCACTGATTCATCTAGTAAAGAAATGAGACAAGCATGTTTTGGTTATTTGAGCCTTGGAGGAGTTTTTTCAAATGGACCAATAGCTCTACTCTCTGGCCTTAATCCTCGTCCGTTAATTTTGCTTCTTCATTTCTTTGGCGTAGCTATATATGGGGTTGCTCGCTTACTCTCACCATTTCCTTCTCCTAGACGGATTTGGATTGGAGTTAGATTGATTTTGGGTGCATTAGGTATCATTGTTCCAATTATCAAGGCTGAAGGAGTTAGACAAATGTTCTTCCCATTCACTATGCCCCGATACTACAAAACACCTCCTACAAAGTTTTCATAA 1587 0.3693 MVYLYILIGIILIAYCSLLFVFVVYGSTSKKKTTGLEINDCVNISSATKNEKLFPQETSESIDIIIVGAGVAGSALAYTLGKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQKVFGYALYKDGKNTKLSYPLKKYNVDISGRSFHNGRFIQRMREKASSLSNVRLEQGTVTSLIEEKGTIKGVYYKTKSGLEIKANAPLTIVCDGCFSNLRRSLCNSKVDVPSHFIGFILEKCDLPYANHGHVILGDPSSILFYPISSTEIRCLVDVPATILPSIGNGDMTRYLKTVVTPQIPPELRRSFVEAIDKGNIRSMPNKSMTTCPYPKPGALLIGDALNMRHPLTGGGMTVALSDIVLLRDLLRPLHDLHHASAHCKYLESFYILRKPAASTINALAGALYKVFCVSTDSSSKEMRQACFGYLSLGGVFSNGPIALLSGLNPRPLILLLHFFGVAIYGVARLLSPFPSPRRIWIGVRLILGALGIIVPIIKAEGVRQMFFPFTMPRYYKTPPTKFS* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2518 528 PANTHER SQUALENE MONOOXYGENASE 1 526 IPR040125 GO:0004506|GO:0016126
Tpr2g2518 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 63 85 - -
Tpr2g2518 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 212 227 - -
Tpr2g2518 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 340 355 - -
Tpr2g2518 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 355 371 - -
Tpr2g2518 528 SUPERFAMILY FAD/NAD(P)-binding domain 62 437 IPR036188 -
Tpr2g2518 528 Gene3D - 56 440 IPR036188 -
Tpr2g2518 528 Pfam NAD(P)-binding Rossmann-like domain 66 92 - -
Tpr2g2518 528 Pfam Squalene epoxidase 213 485 IPR013698 GO:0004506|GO:0016021|GO:0050660
Tpr2g2518 528 PANTHER SQUALENE MONOOXYGENASE-RELATED 1 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2518 Tpr-Chr2 30051226 30053910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2518 25 525 Miscellaneous Gene Families AT1G58440 69.661 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2518 K00511 - gmx:100796946 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1734 3 15370215 15374914 Tpr2g2518 2 30051226 30053910 PCT