Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1335 ATGGCTTTTAACAACAAATTCAAGAAGACTAATTCACCTTCACATTTCAATTTCTGCTTCACCCTTTTCATCATTTCTTTCTTCACAATACCAACTTTTTTCCTCCTCAACAATTTCACCACAAACTCCAAAGGTGCCAACCTTACCAAAAACTTTTCAGGTAATCTTCTTTCAGCTGAGTTTGCATGGAACAGCCTCTCATTTTTACAACACAACCCTGCACCTATAGTTCTCAAAATTGCAGTCTTTTCTAGAAAATGGCCTAGCGGAACCGTTCCCGGCGGCATGGAACGCCATGCTCACACACTTCATACTGCGTTAGCTCGCCGCGGACATCAAGTTCATATCTTCACTTCCCCTTCAGAAGATGAAACAACAACAGGAACAACTTCAATCTCGTCAAAAGGTTCACCGTCTTCACCTTATATTCATTATCACGAGGGCGAGCCGGGTAAGTGGCGTTACAACAAAGCATGGGAACTTTTTCTCGAAGAAAACCAAAGAGATCAACCTTTTGATGTTGTTCATTCAGAAAGTGTAGCACTTCCTCATTGGCTAGCAAAAGAACTTCCAAATCTTGTTGTATCATGGCATGGCATAGCATTAGAAAGCTTGCAATCAAGCCTTTTTCAGGACTTGGCTCGTCTACCAGACGAGCCAAGATCACAAGATTTTGAAAAAGGGTTACAAGGAGTTGTCCCTAAGGTTCTCAATGAGATAAGATTCTTCCACAAATACTCTCATCATGTCGCTATTAGTGATAGTTGCGGCGAAATGTTAAGAGATGTTTACCAAATTCCGAGTAGAAGAGTTCATGTGATCCTCAATGGTGTCGATGAGGACGATTTCAGAGAAGATGTTGAATTAGGAAAAAAGTTTAGAACCGAAATCGGGATTCCAAGTAATGCTAGTTTAGTATTTGGAGTAGCTGGAAGATTAGTGAAGGATAAAGGTCATCCACTTCTTCATGAAGCATTTTCAAGGCTTATAACAAAACACACCAATGTGTATCTGATTGTAGCAGGTTCTGGACCATGGGAGAATAGGTACAAAGATTTAGGGAACCAAGTTCTTGTTCTTGGATCAATGAATCCTTCTAAGCTAAGAGCATTCTATAATGCTATTGATATTTTTGTTAATCCTACATTAAGACCACAAGGACTTGATCTTACACTAATGGAAGCTATGATGATTGGAAAGCCACTTTTGGTATCAAGGTTTCCAAGTATTAAAGGAAGTATAGTTGTTGATGATGAATTTGGTTATATGTTTTCTCCAAATGTGGAATCACTTTTGGAAGCACTTAAAGAAGTTGTAAAGGATGGTAAAGAGAGGCTAGAAAAGAGAGGAAATGCTTGTCGCGAATATGCAAATTCTATGTTTACAGCAAGAAAGATGGCATTAGCATACGAGAGATTGTTTCTATGCATAAAAAGGGATACATTTTGTACCTACCCTTGA 1461 0.3901 MAFNNKFKKTNSPSHFNFCFTLFIISFFTIPTFFLLNNFTTNSKGANLTKNFSGNLLSAEFAWNSLSFLQHNPAPIVLKIAVFSRKWPSGTVPGGMERHAHTLHTALARRGHQVHIFTSPSEDETTTGTTSISSKGSPSSPYIHYHEGEPGKWRYNKAWELFLEENQRDQPFDVVHSESVALPHWLAKELPNLVVSWHGIALESLQSSLFQDLARLPDEPRSQDFEKGLQGVVPKVLNEIRFFHKYSHHVAISDSCGEMLRDVYQIPSRRVHVILNGVDEDDFREDVELGKKFRTEIGIPSNASLVFGVAGRLVKDKGHPLLHEAFSRLITKHTNVYLIVAGSGPWENRYKDLGNQVLVLGSMNPSKLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMIGKPLLVSRFPSIKGSIVVDDEFGYMFSPNVESLLEALKEVVKDGKERLEKRGNACREYANSMFTARKMALAYERLFLCIKRDTFCTYP* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1335 486 PANTHER GLYCOSYLTRANSFERASE 1 486 - -
Tpr2g1335 486 Gene3D Glycogen Phosphorylase B; 77 294 - -
Tpr2g1335 486 MobiDBLite consensus disorder prediction 119 141 - -
Tpr2g1335 486 CDD GT4_PimA-like 79 474 - -
Tpr2g1335 486 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 79 474 - -
Tpr2g1335 486 Gene3D Glycogen Phosphorylase B; 295 458 - -
Tpr2g1335 486 PANTHER GLYCOSYLTRANSFERASE 1 486 - -
Tpr2g1335 486 Pfam Glycosyl transferases group 1 306 448 IPR001296 GO:0016757
Tpr2g1335 486 MobiDBLite consensus disorder prediction 119 140 - -
Tpr2g1335 486 Pfam Glycosyltransferase Family 4 94 281 IPR028098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1335 Tpr-Chr2 15616189 15617817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1335 1 486 Glycosyltransferase AT4G19460 62.151 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1335 - - gmx:100817087 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1335 2 15616189 15617817 Tpr2g1335 2 15616189 15617817 ECH
Tpr2g1335 2 15616189 15617817 Tpr4g4439 4 52078851 52080746 PCT