Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1181 ATGGCGACGAGACGATCCACACCCCTCCTCAAACAACTCCTCACCTCGCGCCACAATCTCACCTCAACTCGCTCCGTAACCTACATGCCCCGACCCGGAGACGGAACACCTCGAAACGTAACACTAATCCCCGGCGACGGAATCGGACCATTAGTAACCGGCGCAGTTGAGCAAGTAATGGAAGCGATGCATGCGCCAGTGTATTTCGAGAAATTCGAAGTGCACGGTAACATGAAAACGATGCCAACTGAAGTAATTGAATCGATTAAGAAGAATAAGGTTTGTTTGAAAGGTGGACTTGCTACTCCTATGGGTGGTGGTGTTAGTTCTCTTAATGTGCAATTGAGGAAGGAGCTTGATCTTTATGCTTCTCTTGTTAATTGCTTTAATCTTCCTGGTTTGCCGACGCGCCATGATAATGTTGATATTGTTGTGATTAGGGAGAATACTGAAGGTGAATATGCTGGACTTGAACATGAGGTTGTTCCTGGTGTTGTCGAAAGCCTCAAGGTAATAACAAAGTTCTGTTCAGAGCGCATTGCTAAATATGCTTTCGAGTATGCTTATCTAAATAACAGAAAGAAGGTGACTGCTGTGCACAAAGCAAACATTATGAAACTTGCAGATGGTTTATTCTTGGAATCTTGTCGAGAGGTTGCCACAAAGTATCCTGGAATCAAGTATAATGAAATTATTGTAGATAACTGTTGCATGCAGCTTGTTTCAAAGCCTGAGCAGTTTGATGTCATGGTAACCCCCAATCTTTATGGAAATCTTGTTGCAAATACAGCGGCAGGCATTGCTGGAGGCACCGGTGTCATGCCCGGAGGTAATGTTGGAGCTGACCACGCTGTATTTGAACAAGGTGCTTCGGCAGGAAATGTTGGTAAGGATAAAGTAGTAAAGGAAAAGAAAGCCAACCCTGTGGCACTCCTCCTTTCGTCTGCAATGATGCTTAGACATCTCCAGTTTCCTGTATTTGCTGAACGATTGGAAAGTGCTGTGAAACGAGTCATTTTAGAGGGCAAATACCGGACAAAGGACCTTGGAGGGACAAGCACCACCCAAGAGGTTGTTGATGCAGTGATAGATGCATTACAATAA 1104 0.4466 MATRRSTPLLKQLLTSRHNLTSTRSVTYMPRPGDGTPRNVTLIPGDGIGPLVTGAVEQVMEAMHAPVYFEKFEVHGNMKTMPTEVIESIKKNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHDNVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGKDKVVKEKKANPVALLLSSAMMLRHLQFPVFAERLESAVKRVILEGKYRTKDLGGTSTTQEVVDAVIDALQ* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1181 367 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 38 366 - -
Tpr2g1181 367 Pfam Isocitrate/isopropylmalate dehydrogenase 39 362 IPR024084 -
Tpr2g1181 367 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 15 365 - -
Tpr2g1181 367 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 36 365 IPR004434 GO:0006099
Tpr2g1181 367 PANTHER NAD-DEPENDENT ISOCITRATE DEHYDROGENASE C,1 15 365 - -
Tpr2g1181 367 SMART Iso_dh_2 39 362 IPR024084 -
Tpr2g1181 367 Gene3D Isopropylmalate Dehydrogenase 24 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1181 Tpr-Chr2 13823994 13828536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1181 K00030 - gmx:100778831 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1181 2 13823994 13828536 Tpr4g4372 4 50981847 50987632 PCT