Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1124 ATGGTGCTCGAGGCAACAATGATCTGTATCGACAATTCCGAATGGATGCGTAACGGAGATTATTCTCCTTCTCGATTTCAAGCTCAAGCTGACGCTGTTAATCTCATTTGCGGTGCTAAGACCCAGTCTAATCCGGAAAATACAGTGGGAGTTCTTATAATGGCAGGGAAGGGTGTTCGTGTTTTGGTCACCCCTACCAGTGATCTAGGCAAGATCTTAGCTTGCATGCATGGACTAGAAGTAGGTGGCGAGATGAACCTAGCTGCTGGTATTCAGGTTGCACAATTGGCTTTAAAGCATCGTCAAAATAAAAAGCAACAGCAAAGGATTATTGTCTTCGCTGGAAGTCCCGTCAAGCATGAAAAGAAAATGTTGGAGATGATAGGGAGAAAGTTGAAAAAGAATAGCGTAGCACTTGATATTGTTAATTTTGGTGAAGACGACGAGGAGAAGACAGAGAAGCTGGAATCACTCCTTGCAGCTGTGAACAATAATGATACAAGCCATATTGTTCATGTTCCAGCTGGTCCAAATGCTCTTTCTGATGTACTTATAAGTACACCAATTTTTACTGGTGATGGGGAAGGTGGAAGTGGCTTTGCTGCTGCTGCTGCAGCAGCTGCAGCTGGAGGTGTATCTGGATATGATTTTGGTGTGGATCCAAACTTAGATCCTGAATTGGCTCTTGCCTTAAGAGTTTCGATGGAAGAAGAAAGAGCCAGGCAGGAAGCAGCAGCAAAAAAGGCTGCAGAAGATACTTCCAAACAAGGAGGTGAGCAGCAAGCCGGCTCACAAGAAGCCAGCTCACAAGATGCGACAATGACCGAGCGTGCCAGTGCATCAACTTCTGAAGCAGAGAATAAGACAACTGATTTGATGGATGATGAGAATGCCCTACTGCAGCAGGCTCTTGCAATGTCAATGGATGAACCTGCGGTTGGTCACGATGTAAAAGATACAGATATGTCAGAAGCATCTGTTGATGACCCTGAGCTGGCACTAGCTCTCCAATTGTCCGTAGCGGATAGTACAAAGGATCAAGCAAGCCAGTCAGAGGTGTTAGCAGATCAATCCGCTGTATCTGATATTCTCGCGTCGCTTCCTGGGGTCGACCTAAATGACCCTTCCATCAAAGATTTGCTGGCATCCATGCAAAATAAGTCTGAGCCGCAGAAGAAGAATGACGACAAGTCATCAAACGAGGAGAAGAAATAA 1215 0.4543 MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVLIMAGKGVRVLVTPTSDLGKILACMHGLEVGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPVKHEKKMLEMIGRKLKKNSVALDIVNFGEDDEEKTEKLESLLAAVNNNDTSHIVHVPAGPNALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGYDFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEDTSKQGGEQQAGSQEASSQDATMTERASASTSEAENKTTDLMDDENALLQQALAMSMDEPAVGHDVKDTDMSEASVDDPELALALQLSVADSTKDQASQSEVLADQSAVSDILASLPGVDLNDPSIKDLLASMQNKSEPQKKNDDKSSNEEKK* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1124 404 MobiDBLite consensus disorder prediction 255 287 - -
Tpr2g1124 404 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 HOMOLOG ISOFORM X1 1 404 - -
Tpr2g1124 404 SMART VWA_4 2 175 IPR002035 -
Tpr2g1124 404 ProSiteProfiles VWFA domain profile. 5 189 IPR002035 -
Tpr2g1124 404 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 1 404 - -
Tpr2g1124 404 MobiDBLite consensus disorder prediction 240 292 - -
Tpr2g1124 404 SUPERFAMILY vWA-like 4 175 IPR036465 -
Tpr2g1124 404 Pfam von Willebrand factor type A domain 6 115 IPR002035 -
Tpr2g1124 404 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 222 241 IPR003903 -
Tpr2g1124 404 Coils Coil 232 252 - -
Tpr2g1124 404 Pfam Ubiquitin interaction motif 224 237 IPR003903 -
Tpr2g1124 404 Pfam Ubiquitin interaction motif 328 342 IPR003903 -
Tpr2g1124 404 Pfam Ubiquitin interaction motif 295 310 IPR003903 -
Tpr2g1124 404 Gene3D von Willebrand factor, type A domain 3 186 IPR036465 -
Tpr2g1124 404 Gene3D - 220 309 - -
Tpr2g1124 404 MobiDBLite consensus disorder prediction 240 254 - -
Tpr2g1124 404 MobiDBLite consensus disorder prediction 389 404 - -
Tpr2g1124 404 SMART uim 222 241 IPR003903 -
Tpr2g1124 404 SMART uim 327 346 IPR003903 -
Tpr2g1124 404 SMART uim 295 314 IPR003903 -
Tpr2g1124 404 CDD VWA_26S_proteasome_subunit 1 188 - -
Tpr2g1124 404 MobiDBLite consensus disorder prediction 368 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1124 Tpr-Chr2 13186569 13191830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1124 K03029 - gmx:100814594 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1124 2 13186569 13191830 Tpr2g1124 2 13186569 13191830 ECH
Tpr2g1124 2 13186569 13191830 Tpr4g4294 4 50096025 50103015 PCT