Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1113 ATGGGTCTATTCTTATGTAACAAACACTATCCTCAACCCTTCTTATGTTTCTTAATCTTCCTCATTTTCAACGTGGTTTCAGTTTCAGGAGCAACATTTACATTTACGAACAAGTGTGATTACACAGTATGGCCAGGAATTTATGGAAAACCGGAACTTGGAACAACCGGTTTCGAATTAACAAAAGCAATTACCAGAACGTTCCAAGCACCAACTGGTTGGTCCGGTAGATTCTGGGGACGAACCGGTTGTCAATTTGATTCCACCGGTCACGGAACATGCTCAACCGCCGATTGTGGCTCCGGAGAAATCTCCTGCAACGGCGCAACAGCTTCACCACCGGCAACACTCGCCGAATTCACACTCGGAACCGGTTCAATGGACTTCTACGATGTTAGCCTCGTCGATGGTTACAATCTTCCGATGATGGTGACTACCAGCGGTGGTACAGGTTCGTGTGAGGTCACTGGCTGTAGCTCCGATCTTAATCTTAAGTGTCCGTCGGAATTGAAGGTTGAAGGTGGTGGCGCGTGTAATAGTGCTTGTGGCGCGTTTGGTAAACCGGAATATTGTTGTAATGGCGCGTTTAGTAATCCTGACACGTGTCATCCTTCTGTGTATTCTCAAATGTTTAAAACTTCATGTCCTAAAGCTTATAGCTATGCTTATGATGATGCAAGTAGCACTTTTACTTGTTCTGGTGCTGATTATTCAATCACATTTTGTCCCACTTCTTCATCAAGTCTGAAGTCTGCAGCAGATCCATCTACTAATAATACGAAGGGAACGGGTTTGGGTTCGGGTTCAAGGGGTGGCTCGGAGCAATCGGAGCTGCCTAACGATGCGTGGATGGCTTATATGGCTACGGCTTCTGGGGGTTCTACTATGGTTTCTTTGTTGGTGGTGGTGGTTGGTTTCATGTTTAGTATTTGTGGTTGTTTTGTGTTTCCTTCATAG 957 0.4545 MGLFLCNKHYPQPFLCFLIFLIFNVVSVSGATFTFTNKCDYTVWPGIYGKPELGTTGFELTKAITRTFQAPTGWSGRFWGRTGCQFDSTGHGTCSTADCGSGEISCNGATASPPATLAEFTLGTGSMDFYDVSLVDGYNLPMMVTTSGGTGSCEVTGCSSDLNLKCPSELKVEGGGACNSACGAFGKPEYCCNGAFSNPDTCHPSVYSQMFKTSCPKAYSYAYDDASSTFTCSGADYSITFCPTSSSSLKSAADPSTNNTKGTGLGSGSRGGSEQSELPNDAWMAYMATASGGSTMVSLLVVVVGFMFSICGCFVFPS* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1113 318 Gene3D Thaumatin 31 243 IPR037176 -
Tpr2g1113 318 ProSiteProfiles Thaumatin family profile. 30 245 IPR001938 -
Tpr2g1113 318 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 10 267 - -
Tpr2g1113 318 CDD TLP-PA 32 242 - -
Tpr2g1113 318 Pfam Thaumatin family 37 243 IPR001938 -
Tpr2g1113 318 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Tpr2g1113 318 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Tpr2g1113 318 PRINTS Pathogenesis-related protein signature 90 119 IPR001938 -
Tpr2g1113 318 PRINTS Pathogenesis-related protein signature 128 144 IPR001938 -
Tpr2g1113 318 PRINTS Pathogenesis-related protein signature 233 242 IPR001938 -
Tpr2g1113 318 SUPERFAMILY Osmotin, thaumatin-like protein 31 243 IPR037176 -
Tpr2g1113 318 ProSitePatterns Thaumatin family signature. 90 106 IPR017949 -
Tpr2g1113 318 SMART tha2 33 243 IPR001938 -
Tpr2g1113 318 MobiDBLite consensus disorder prediction 252 274 - -
Tpr2g1113 318 PANTHER OS03G0233200 PROTEIN 10 267 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1113 Tpr-Chr2 13093209 13095404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1113 15 261 Receptor kinase-like Gene Family AT5G38280 47.692 3.00e-71 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1113 - - gmx:100815652 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1113 2 13093209 13095404 Tpr2g1113 2 13093209 13095404 ECH
Tpr2g1113 2 13093209 13095404 Tpr4g4282 4 49974684 49977319 ECH