Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0960 ATGTCTACGGGAAAAGAAACAAATGGGAACAACAAAGTAGTATCCATGGAAGATATTTGTGCAAATGAAAATAGTCTCAACAAGCATGCTTGTGCTTGTGTTTTGGCTGCCACTATTATCTCTGCAATATTTGGTTATATTACAGGAGTTATGGCTGGAGCACTCTTATTCATAAAAGAAGAACTCATGATCAGTGACATGCAAGTTCAACTTCTAGCAGGAATCTTAAATGTTTGTGCATTACCAGCATGCATGATTGCCGGAAGATTATCCGATTACATTGGTCGACGCTACACAATCATGTTATCTTCGATATTCTTCTTCTTAGGCTCAACATTAATGGGATATGGTTCATCTTTTCCAATCTTAATTACCGGAAGAAGCATTGCCGGATTCGGTGTTGGTTTTGCACTTATAATAGCACCTGTTTATAGTGCAGAAATTTCATCACCTTCTTATAGAGGTTTTCTAACTTCTCTACCTGATCTTTCCATTAACATAGGTTTCTTACTTGGTTATGTCTCAAATTTTTTCCTTGGAAAGTTATCTTTAAGACTTGGATGGAGAATAATGTTAGCTATTCCTTCAATTCCTTCAATTGGGTTAGTAATTCTAATGCTAAAATTAGTAGAATCACCAAGATGGTTAGTAATGCAAGGAAGGTTAGGTGATTCTAGAAAAGTGCTTTTATTAATCTCTAGTTCAAAAGAAGAAGCTGAAAAAAGATTGAAAGAAATAAAAATCGCCGTTGGAATCGACGAAAATTGCATCCAAAACATTGTTCATGTGCCACATAAAACTAAAAGTGGTGGGGGTGCATTAAAAGAAATGTTCTATAAACCCCCACCACATGTTAGTAGGATATTATTTGCAGCTATTGGTGTTCATATTTTTCAACAAATTTGTGGAGTTGAAGGTATTGCAGTTTATAGTCCAAGAGTGTTTGAAAGAACAGGAATCACTGAAAAAAGTACATTACTTTTAGCCACGGTTGGTATTGGAATAAGTCAAACATTATTTACATTGTTATCAAGTTTTTTGTTAGATAAAATTGGGAGAAGGACTTTATTGTTGGTAAGTTCAGGAGGTGTAGTTGTGTCAATGTTAGGATTAAGTATTTTTTCAGCTATAGTTGAAAATTCTAAGTTAGGTGAAGAACCATTATGGGCTATAATTTTTATAGTTGTAGTTGTGTATATTTTGATGGCTTTTAATGCTATTGGAATTGGGCCAGTGACATGGGTTTATAGTTCTGAGATTTTTCCACTTAGGTTAAGAGCACAAGGTCTTGGTGTTTGTGTGGTTGTGAATAGAATTACTAATGTGGCTGTGGTTACTAGTTTTATTTCAATTTTTAAGACTATAACATTGGGTGGAACTTTCTTTATGCTTGTGGGTATTAATGCTTTGGGATGGTGGTTTTATTATTCTTTCTTGCCTGAAACTAAAGGAAGATCATTAGAAGATATGGAGACTATCTTTGGGAAAGATTCTAAGGTTGAGGTACAAATGAAGTCCGGGAGCAATAATGCTTAG 1536 0.347 MSTGKETNGNNKVVSMEDICANENSLNKHACACVLAATIISAIFGYITGVMAGALLFIKEELMISDMQVQLLAGILNVCALPACMIAGRLSDYIGRRYTIMLSSIFFFLGSTLMGYGSSFPILITGRSIAGFGVGFALIIAPVYSAEISSPSYRGFLTSLPDLSINIGFLLGYVSNFFLGKLSLRLGWRIMLAIPSIPSIGLVILMLKLVESPRWLVMQGRLGDSRKVLLLISSSKEEAEKRLKEIKIAVGIDENCIQNIVHVPHKTKSGGGALKEMFYKPPPHVSRILFAAIGVHIFQQICGVEGIAVYSPRVFERTGITEKSTLLLATVGIGISQTLFTLLSSFLLDKIGRRTLLLVSSGGVVVSMLGLSIFSAIVENSKLGEEPLWAIIFIVVVVYILMAFNAIGIGPVTWVYSSEIFPLRLRAQGLGVCVVVNRITNVAVVTSFISIFKTITLGGTFFMLVGINALGWWFYYSFLPETKGRSLEDMETIFGKDSKVEVQMKSGSNNA* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0960 511 ProSitePatterns Sugar transport proteins signature 2. 129 154 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr2g0960 511 TIGRFAM SP: MFS transporter, sugar porter (SP) family 24 489 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr2g0960 511 ProSitePatterns Sugar transport proteins signature 1. 344 361 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr2g0960 511 ProSitePatterns Sugar transport proteins signature 1. 87 104 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr2g0960 511 SUPERFAMILY MFS general substrate transporter 34 491 IPR036259 -
Tpr2g0960 511 Pfam Sugar (and other) transporter 34 494 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tpr2g0960 511 ProSiteProfiles Major facilitator superfamily (MFS) profile. 33 483 IPR020846 GO:0022857
Tpr2g0960 511 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 20 499 IPR045262 GO:0015144
Tpr2g0960 511 Gene3D MFS general substrate transporter like domains 22 498 IPR036259 -
Tpr2g0960 511 PRINTS Sugar transporter signature 41 51 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr2g0960 511 PRINTS Sugar transporter signature 124 143 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr2g0960 511 PRINTS Sugar transporter signature 299 309 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr2g0960 511 PRINTS Sugar transporter signature 395 416 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr2g0960 511 PRINTS Sugar transporter signature 418 430 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr2g0960 511 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 20 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0960 Tpr-Chr2 11568452 11571564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0960 16 508 Organic Solute Cotransporters AT4G36670 49.091 5.54e-180 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0960 - - gmx:100786322 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0960 2 11568452 11571564 Tpr4g4142 4 48440422 48442871 ECH
Tpr2g0960 2 11568452 11571564 Tpr2g0960 2 11568452 11571564 ECH