Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0772 ATGGCCGATGGCTTCTGGAACCGCCAGCAGCAGACTCTTCTCCCTCATTCCGGCCTGCACAAACGACCTCGTTCCGACTACGAAATGCCTGCCTCTGGTCTGCCTCCAGGCAACGAGATGCATAATTATCTTGCTCGCGAAGAGGACCGTTCTGGTCACCCAATGGTAAAGGACACAAAAACAATTGGATCTGCTTATGATCGCTACCTTCAGAGTGGGCAACTTTCTTCATTTACTTCTGGGGAAGCCAGTACAATTGGTGGTCTCGGATTGCAAAGGGGTGTCGGTGGATTACCGAATCATTCACTAGGTGATCCTGCTGTCATGATGGGGCGTCATGGGGGTGGTGGTCCTGATCTGGCACCAAATGGGCGAGGTATTAATTATGGTTTTCAGCCACCGATGGATCCAGTTTCCAGGCCTGGACCTGAGACAGCACTTCTACCTCCAGATGCTTCACCTACTTTATATATTGAAGGTCTACCTTCTGATTGTACCAGAAGGGAAGTGGCTCATATTTTCCGCCCTTTTGTGGGATATAGAGAAGTGAGACTTGTAAGCAAAGAGGCCAAACATCGTGGAGATCCTCTGATCCTTTGTTTTGTGGACTTTGCAAATCCGGCTTGTGCAGCAACTGCTTTGAGTGCCTTGCAAGGCTATAAAGTCGATGAAATCAATCCCGAGTCTAGTCATTTGCGGCTTCAGTTTTCTCGGTATCCAGGCCCAAGAAGTGGAGGTGGTCCAAGAAGTAGTGGACCTGGTCCTAGAGGGGGACCTGGATCTCGTGGTAAGAGGTGA 798 0.4987 MADGFWNRQQQTLLPHSGLHKRPRSDYEMPASGLPPGNEMHNYLAREEDRSGHPMVKDTKTIGSAYDRYLQSGQLSSFTSGEASTIGGLGLQRGVGGLPNHSLGDPAVMMGRHGGGGPDLAPNGRGINYGFQPPMDPVSRPGPETALLPPDASPTLYIEGLPSDCTRREVAHIFRPFVGYREVRLVSKEAKHRGDPLILCFVDFANPACAATALSALQGYKVDEINPESSHLRLQFSRYPGPRSGGGPRSSGPGPRGGPGSRGKR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0772 265 MobiDBLite consensus disorder prediction 1 24 - -
Tpr2g0772 265 SUPERFAMILY RNA-binding domain, RBD 150 263 IPR035979 GO:0003676
Tpr2g0772 265 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 154 239 IPR000504 GO:0003723
Tpr2g0772 265 CDD RRM_RBPMS_like 154 235 - -
Tpr2g0772 265 PANTHER RNA-BINDING PROTEIN 2 7 250 - -
Tpr2g0772 265 MobiDBLite consensus disorder prediction 1 16 - -
Tpr2g0772 265 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B 7 250 - -
Tpr2g0772 265 SMART rrm1_1 155 228 IPR000504 GO:0003723
Tpr2g0772 265 MobiDBLite consensus disorder prediction 234 265 - -
Tpr2g0772 265 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 156 223 IPR000504 GO:0003723
Tpr2g0772 265 Gene3D - 151 239 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0772 Tpr-Chr2 9309323 9315046 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0772 - - cam:101512502 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0772 2 9309323 9315046 Tpr1g0836 1 7028684 7033819 PCT